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scnpilot_p_inoc_scaffold_32833_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..733)

Top 3 Functional Annotations

Value Algorithm Source
Putative signal transduction histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V0S1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 252.0
  • Bit_score: 334
  • Evalue 9.00e-89
  • rbh
signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 252.0
  • Bit_score: 334
  • Evalue 2.60e-89
Putative signal transduction histidine kinase {ECO:0000313|EMBL:ADU36772.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 252.0
  • Bit_score: 334
  • Evalue 1.30e-88

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGTGCACAACAAATCGGAAGCGGTGTTCGAGGCCCGCAACCTCGGCTGGCTTCCCTAGCGTGATTCCCGGGGGGGTGCGCCGCTGGCTGCTGGCGGCGCTGTGGCTGCCGCTGCTCGCGGCAATGGCGCTCCACGCGCATGCCTCCGGCGCCGAGGTACCCGAAACTCCCGGCGTGCTCGACGTGAGTTCCGCCGAAGCCACCCTCGAGCCCGACGGCCTGCCGACGCAGGTGCGCCGCGTCCCCTTGCCCTTTCGCTGGGACCATGAATTTCCCGGCCTCGGCGGCAAGGCCAGCTACCGCATCGAGCTTCCCGCCTCCGCGGTGCCGGCGAACGCCCCGTCGGCGCTGCTGATGTCCGGCGTTGGCAACCAGGTGGCCGTGTCTTTCAACGATGCATTGGTGGCCAGCTACGGCACGTTGGGCGACCCGGGCTACGAGGCCTCCAAGGGCAACCACCTGGTGCATGTCGCGGCCGCGCTGCACCGGGAGGGCCAGCCGCAGGTGCTGGTGGTGCGCACCACCATCCAGCGGCAGCGCGGTGCCGGGCTGGCCAGCGTTCAGTACGGCACCGAGGCCTCGCTCGCGCCCATCTACCGCGCACAGCAGAACTGGCGCAACACCTCGGCCATCGTCTATGCGGTCAGCCTGCTGCTGATGGGCGGCATGGCGGGCGGGCTGTGGCTGCGCCAGCGCGATGCGCTCTACGGCTGCTTCGCGCTCGCCGCGCTC
PROTEIN sequence
Length: 244
MCTTNRKRCSRPATSAGFPSVIPGGVRRWLLAALWLPLLAAMALHAHASGAEVPETPGVLDVSSAEATLEPDGLPTQVRRVPLPFRWDHEFPGLGGKASYRIELPASAVPANAPSALLMSGVGNQVAVSFNDALVASYGTLGDPGYEASKGNHLVHVAAALHREGQPQVLVVRTTIQRQRGAGLASVQYGTEASLAPIYRAQQNWRNTSAIVYAVSLLLMGGMAGGLWLRQRDALYGCFALAAL