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scnpilot_p_inoc_scaffold_32833_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(675..1364)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000379921E similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 229.0
  • Bit_score: 385
  • Evalue 3.20e-104
  • rbh
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 231.0
  • Bit_score: 363
  • Evalue 6.30e-98
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADU36773.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 231.0
  • Bit_score: 363
  • Evalue 3.10e-97

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGACGCCGGCAACGCAGGTTGCCCTGGTCGAAGACGACACCGGCATGCGCCAGCGCATCGCGCGCGTGGTCGACGCGGATCCGTTGCTGAGCCTGGCCTTCAGCGCCTCCAATGCCACCGACATCCTGGCCTGGCTGAACGAGAACCCGGTCGACGTGCTGCTGGTGGACCTGGGCCTGCCCGACCGCCCCGGGCTGCAGGTGATCAGCCAGTGCCGCACCATGCAGCCGGCCTGCGCGGTGATGGTGCTGTCGATCTTCGGCGACGAGGCCAACATGGTCCAGGCCTTCGAGGCCGGCGCCAGCGGCTACCTGCTGAAGGACGGCACCGAGACAGAGCTGGCCACCCACATCCGCCACCTGCGAGCGGGCGGCTCGCCCATGTCGCCGGTGATCGCGCGGCAGCTGCTGCGCCGCTGGCAGGCCCGTGCCGGCACCGCGGCGCCCGCCAAGCCGGCCGCATCGTCGCCCTTCGGCGGCGGCAGCATTCGCCCGGAGCGCCTGTCGCCGCGCGAGTTCGAGGTGCTCGACCTCGTCTCTCGTGGTTTCACCTATGTCGAAGTGGGCACGCAAATGGGAGTCTCGGCCTCGACAGTCCAAACCCATATCCGCAATATCTACGGCAAGCTGGATGTGCACAACAAATCGGAAGCGGTGTTCGAGGCCCGCAACCTCGGCTGGCTTCCCTAG
PROTEIN sequence
Length: 230
MTPATQVALVEDDTGMRQRIARVVDADPLLSLAFSASNATDILAWLNENPVDVLLVDLGLPDRPGLQVISQCRTMQPACAVMVLSIFGDEANMVQAFEAGASGYLLKDGTETELATHIRHLRAGGSPMSPVIARQLLRRWQARAGTAAPAKPAASSPFGGGSIRPERLSPREFEVLDLVSRGFTYVEVGTQMGVSASTVQTHIRNIYGKLDVHNKSEAVFEARNLGWLP*