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scnpilot_p_inoc_scaffold_37002_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 180..1091

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Variovorax paradoxus RepID=UPI00037635CE similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 304.0
  • Bit_score: 597
  • Evalue 7.10e-168
  • rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 307.0
  • Bit_score: 599
  • Evalue 3.40e-168
30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 304.0
  • Bit_score: 595
  • Evalue 7.70e-168

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGGACAGAAAATCCACCCAACCGGGTTCCGCCTTGCGGTTACCCGTAACTGGTCCAGCCGCTGGTACGCAAGCGACCGCGATTTCGCGGGCATGCTGGCCGAAGACATCAAGGTTCGCGAATACCTGAAGAAGAAGCTGAAGAACGCTTCGGTGTCGCGCGTCATGATCGAACGTCCCGCCAAGAACGCACGCATCACGATCTACTCGGCACGTCCGGGCGTCGTGATCGGCAAGAAGGGCGAAGACATCGAGAACCTCAAGCGCGAACTGGGCAAGCAGCTCGGCGTGCCGGTTGCGGTCAACATCGAAGAAGTGCGCAAGCCCGAAATCGATGCGCAGCTGATCGCCGACAGCATTACGCAGCAGCTCGAAAAGCGGATCATGTTCCGCCGTGCCATGAAGCGCGCCATGCAGAACGCCATGCGTCTGGGTGCCCTGGGCATCAAGATCATGTCGGCTGGCCGCTTGAACGGCATCGAAATCGCACGTACCGAGTGGTACCGCGAAGGCCGCGTGCCGCTGCACACCCTGCGCGCCGACATCGACTACGGCACCTCGGAAGCCAAGACCACCTACGGCGTCATCGGCGTCAAGGTCTGGGTCTACAAGGGCGACACGCTGGGTCGTAACGACCTGCCGGCCGTTGAAACGCCGCGTCCCGAAGAAGAACGTCGTCCGCGCGGTCCGCGCCGTGATGGTCGCCCTGGCGACCGTCCGGGTGGCGACCGTCGTGGTCCCGGCCCCCGTGCCGGCGGCCGTGGCCCGATCGGTGGCAACACCGCGCCGGCCGATGGCAGCGACAAGCCCGCAGAAGCAACCGGCGGTGCCGGTGCAGACTCGAAACCCGCCGTTAAGCGCGTCCGCAAAGCCGCGCCCGCTGCAGCAGCGGACGGTGCCAAGACCGAGTAA
PROTEIN sequence
Length: 304
MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERPAKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSITQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRADIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPAVETPRPEEERRPRGPRRDGRPGDRPGGDRRGPGPRAGGRGPIGGNTAPADGSDKPAEATGGAGADSKPAVKRVRKAAPAAAADGAKTE*