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scnpilot_p_inoc_scaffold_37002_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1144..1560

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=2 Tax=Variovorax RepID=E6VBD9_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 277
  • Evalue 9.80e-72
50S ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 277
  • Evalue 2.70e-72
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 277
  • Evalue 1.40e-71

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCTGCAACCTGCACGCAGAAAGTTCCGCAAGGAACAAAAGGGCCGCAACACCGGCATCGCAACCACGGGTAACTCGGTTGCGTTCGGTGACTTCGGTCTCAAATGCACCGACCGCGGCCGCCTCACGGCGCGCCAGATCGAAGCCGCTCGTCGCGCGATCTCGCGTCACGTGAAGCGCGGTGGCCGTATCTGGATCCGCGTGTTCCCGGACAAGCCGATCTCGACCAAGCCCGCAGAAGTGCGGATGGGTAACGGTAAGGGCAACCCCGAGTACTACGTCGCTGAAATTCAGCCTGGCAAGATCGTGTTCGAGATCGTCGGCGTGCCCGAAGAACTCGCCCGCGAAGCGTTCCGCCTGGCCGCCGCCAAGCTTCCGCTGCGTACGACTTTCGTCGCTCGCCAGCTCGGCGCCTGA
PROTEIN sequence
Length: 139
MLQPARRKFRKEQKGRNTGIATTGNSVAFGDFGLKCTDRGRLTARQIEAARRAISRHVKRGGRIWIRVFPDKPISTKPAEVRMGNGKGNPEYYVAEIQPGKIVFEIVGVPEELAREAFRLAAAKLPLRTTFVARQLGA*