ggKbase home page

scnpilot_p_inoc_scaffold_37077_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(786..1178)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRU2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 130.0
  • Bit_score: 244
  • Evalue 6.60e-62
Uncharacterized protein {ECO:0000313|EMBL:EYR78986.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 130.0
  • Bit_score: 244
  • Evalue 9.20e-62
4-oxalocrotonate tautomerase similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 126.0
  • Bit_score: 121
  • Evalue 2.40e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGCCCTTCCTTCACATCCGCCTTGCCGGCAAGAACCTGACGGACGGCGAGCGCCTGCACCTTCAGGACCAGGCGACCCGCCTTGCCGTCACGCTGCTTGGCAAGCGCGCCGAGGCGACCGCGGTTCTCGTCGAGGGAACACCGATCGCCAACTGGACCATCGGCACTCACCGGCAGAAGGTGGCCGGACACTTCGAGATCCTGATCAGCCAGGGCACGAACACGACGGAGGAAAAGGCCCGCTTCATCGCCGCCGCCTATGCGCTGCTCGAAGAAACGCTGGGCGCGCATCTTAACCCCGTGACCTATGTGGTCATCCGCGATATCGCGATGGACAGCTGGGGCTATGGCGGCAGGACGCAGGAGAGCCGGCGCGTTGCTGTGGCGGCATGA
PROTEIN sequence
Length: 131
MPFLHIRLAGKNLTDGERLHLQDQATRLAVTLLGKRAEATAVLVEGTPIANWTIGTHRQKVAGHFEILISQGTNTTEEKARFIAAAYALLEETLGAHLNPVTYVVIRDIAMDSWGYGGRTQESRRVAVAA*