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scnpilot_p_inoc_scaffold_37077_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1274..1738

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator PecT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWJ2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 155.0
  • Bit_score: 292
  • Evalue 2.50e-76
HTH-type transcriptional regulator PecT {ECO:0000313|EMBL:EYR78987.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 155.0
  • Bit_score: 292
  • Evalue 3.50e-76
lrhA; Transcriptional regulator LrhA similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 152.0
  • Bit_score: 193
  • Evalue 5.90e-47

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGGTTTTACCCCGCAACTTTGACATGGACGTGCTGCGTACCTTCGTCACCGGGGTACGGCTCGGCAGTTTTGCGAAAGCCGCGGAGGCGCTGGGGCGCACGCCGCCGGCTGTCAGCCTGCAACTCAAGAAGCTCGCCGAGCTGAGTGGCCAGACGCTTTTCACCAGGCAGGGCAGGGGGCTTGCGCTTACCGATGCCGGCGAAGCGCTGCACGACTACGCGGTCCGCATCCTCGACCTGAACGACGAGGCGATGATGATGCTCGGTTCCGGCCGGACGCTCGACGGCTGGTTGCGGCTCGGCATCCCGCAGGATTTTGCCGAGACGTCGCTGCCGCCGGTGCTCGGCCGCTTTTGCCGGGCGCATCCCAAGCTGCGTGTCGAGGCGCGGGTCGATCGCGGTGCCAAGCTGGTTGCCGCGGTGGAGCGCGGCGACCTCGACATGGCTGTTACCTGGGGTGGCCAG
PROTEIN sequence
Length: 155
MVLPRNFDMDVLRTFVTGVRLGSFAKAAEALGRTPPAVSLQLKKLAELSGQTLFTRQGRGLALTDAGEALHDYAVRILDLNDEAMMMLGSGRTLDGWLRLGIPQDFAETSLPPVLGRFCRAHPKLRVEARVDRGAKLVAAVERGDLDMAVTWGGQ