ggKbase home page

scnpilot_p_inoc_scaffold_45067_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(157..753)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway protease TraF-like protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6ESV4_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 203.0
  • Bit_score: 265
  • Evalue 3.20e-68
type IV secretory pathway protease TraF-like protein Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 198.0
  • Bit_score: 379
  • Evalue 3.70e-102
type IV secretory pathway protease TraF-like protein similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 203.0
  • Bit_score: 265
  • Evalue 9.10e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Sphingomonadales_63_15 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGTTCAGGCTCGCCTGGAACGCCGCTAGAGGTATCGCGCCACGGCTGCGCGCGCTGCCAAAGGAGGCCGCGCTAGCGCTGGGAGCGGCGCGATCTGATGAACCGGGCCGCCCCCTCCAGCTGGCCAAAGCCTGCGCTATCATTCTCCCGATTGCGGCCGTCACCGCATGGGGGCTCCCGCAACTGACGCTCATCATGTCGCCTTCGATCGACGCCTGGGTGGTGCGCAAAGCGCCGGGGCCTATCCACCGCGGCGATCTGGTCTCGTTCAAACTCGTCCATCCGCTGGCCGGACCCGCGCCGGTCGATGTCACCAAATATGCGCTCTGTTTTCCCGGTGACCGGATAGAGATCGTCGAGACGCCTTCAATGACGTCGGGCGCCTGGGATGGCCGCTACTATTGCAATGGACATCTGCTCGGCATCAGCAAGGCGGTGGGGCATAATGGCCAGCGGCTTAGCCACTGGACACCGGACGCGCAGCGCATTGCTGCGGGGCATATCTATGTCGGTTCAGCCCATGCGAGCGGGTTCGACAGCCGTTATTATGGTCCGGTAGCCATCTCGCGCCTTATCCGAATGGAGAAGCTGCTATGA
PROTEIN sequence
Length: 199
MFRLAWNAARGIAPRLRALPKEAALALGAARSDEPGRPLQLAKACAIILPIAAVTAWGLPQLTLIMSPSIDAWVVRKAPGPIHRGDLVSFKLVHPLAGPAPVDVTKYALCFPGDRIEIVETPSMTSGAWDGRYYCNGHLLGISKAVGHNGQRLSHWTPDAQRIAAGHIYVGSAHASGFDSRYYGPVAISRLIRMEKLL*