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scnpilot_p_inoc_scaffold_45067_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(725..1486)

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6ESV3_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 254.0
  • Bit_score: 356
  • Evalue 3.00e-95
  • rbh
type-F conjugative transfer system pilin assembly protein TrbC Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 253.0
  • Bit_score: 468
  • Evalue 7.60e-129
type-F conjugative transfer system pilin assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 254.0
  • Bit_score: 356
  • Evalue 8.50e-96

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Taxonomy

RLO_Sphingomonadales_63_15 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
GACCAGGCGCAAGCGCAAGGCGCTGTTGCCATGGAGCGGCTGAAGGGGAGTATCGCCAGGCGGAAGCCCGATACCACCGCCGGGCCGACACAACTTCCCGCACTTTCCGATGAACAGCGGCGGCGGGCATTTGAAGGGTTGCGAAAACATGGCGCATCGCCGGTCATGGATGCACGGGCGCGCTCGGCTCTCGACAAAGGCAAGGCAGGCTTAGCTGCCGAACGCGAAATTGCCGCAAAACGCCTGTCACAGGCCTTGGGCCTCGAAGCGCCGGACATGCAGGCGGTAGCAGCTGTCATAGCGCCGCCCGCACAATCAGGCAGGGTTCCGCTGCTTTTTGCCTCATCCTCCATGCCTGTTGCGATATTACGTTCCTATGCTGCCCAGCTTGAGCGCGTCGGCGGTGTGATCGCCTTTCGCGGCATGCCCGGCGGACTGTCGCAGGTCGCGCCGATGGCAAAGCTGAGCGCGCAGATATTACGGATCGACCCGGGCTGCGAAGGCCCGGCCTGCGCGATGCGCAATGTCCAGATCATCATCGATCCGTTGGTGTTCCGCCAGCACGGGATCATACGCGTACCCGCGCTGGGTCTCATCCCTGCCGATCCGACCCAGCCCTATTGTGAACGCGAGGAGAATAGCCCGCAAAGCCAGCACATCATCTATGGCGATGCGGCACTGTCGGGATTGCTGGAAGAATATGCCCGTCTGGGCGGAGCCAGGGAGGTCGCCGATGTTCAGGCTCGCCTGGAACGCCGCTAG
PROTEIN sequence
Length: 254
DQAQAQGAVAMERLKGSIARRKPDTTAGPTQLPALSDEQRRRAFEGLRKHGASPVMDARARSALDKGKAGLAAEREIAAKRLSQALGLEAPDMQAVAAVIAPPAQSGRVPLLFASSSMPVAILRSYAAQLERVGGVIAFRGMPGGLSQVAPMAKLSAQILRIDPGCEGPACAMRNVQIIIDPLVFRQHGIIRVPALGLIPADPTQPYCEREENSPQSQHIIYGDAALSGLLEEYARLGGAREVADVQARLERR*