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scnpilot_p_inoc_scaffold_59900_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..676)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029A0ED7 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 224.0
  • Bit_score: 166
  • Evalue 3.00e-38
Putative outer membrane protein {ECO:0000313|EMBL:EDM35003.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 224.0
  • Bit_score: 159
  • Evalue 6.80e-36
RagB/SusD family protein similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 228.0
  • Bit_score: 135
  • Evalue 1.60e-29

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Taxonomy

Pedobacter sp. BAL39 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 675
ATGAAATATATGCTGGCTTCTGCGGGTGCATTTGTGTTATTTGGCATGACCAGTTGCAATAAGCTTTTGGACAAGATGCCGCAGACACAGGTTGTAACCCAAACCGGAAAGTCTGCATCAGTTACAGCCAATGACGCAGAAAATTTAATTGCCGGAGTTTACGATGCAGAAACAGGGTATGCATACGGGTTAGAGTCGAATGTGTTGGATAAAATTACCAATGGCGATGTGAGGGCGGACAACTGTTATGCCGGAGGTGATAATCCGGATAATATTTCAATCGATCTGTTTACAGACAATGCATTGAATGGAAACATTGCCAGAGACTGGAGAGATTCTTACGGAATTATCGGAGTAATCAACAGCGCTATTCAACAAATTTCAGGTTCTACAGATCCCGCGCTTACCTCGGCGAGAAAGAATCAGATGCTGGGTGAGGCAAGCTTCATGAGAGCTTACACTTATTTTTATCTGGTGAGATTGTATGGCCGCGTGCCAATTATGCTCAAGCCGGTTGACCAAACAAACTCTGAATCGCTGATTAGTTCAACGCTTGTTCCCCAATCCTCAACAGATACAGTTTACCATGCAATACTGAATGATTTGTGGTACGCAAGGCAGAATGTTCAGAATGACAATGTCCCATCGACAAAGGAAATCATAACCAAAGGGGCC
PROTEIN sequence
Length: 225
MKYMLASAGAFVLFGMTSCNKLLDKMPQTQVVTQTGKSASVTANDAENLIAGVYDAETGYAYGLESNVLDKITNGDVRADNCYAGGDNPDNISIDLFTDNALNGNIARDWRDSYGIIGVINSAIQQISGSTDPALTSARKNQMLGEASFMRAYTYFYLVRLYGRVPIMLKPVDQTNSESLISSTLVPQSSTDTVYHAILNDLWYARQNVQNDNVPSTKEIITKGA