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scnpilot_p_inoc_scaffold_59900_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(730..1185)

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Dyadobacter beijingensis RepID=UPI00035FFCE3 similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 147.0
  • Bit_score: 160
  • Evalue 1.10e-36
Membrane protein {ECO:0000313|EMBL:KGO81195.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 150.0
  • Bit_score: 173
  • Evalue 3.00e-40
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 150.0
  • Bit_score: 160
  • Evalue 5.30e-37

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Taxonomy

Flavobacterium beibuense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 456
GGTTCACAGGGAAATAAAATTTTTAATGCAGGGCGTTTGGAAGCTGAAGCTATGGTGAATTCTGCAAACCAAAGCGAGGCCGTTATTAACAGATGGCAGAAACCGGGAGATATTACAGACATGCCGGGTGTAAGCACAAACGGGAGTACAAACAATTCTTTGATATCGACCCGCTTTCTTGAAAACGGATCTTACCTGAGATTTAAGACGATTACACTTTCGTACGAGTTTGATCCAAAAGTTTTGTCGGGTATTGGTTTAAGAAGTGCTACAGCCTATGTTTCGGCAAACAATCTTTTCACCGTTACAAAGTACAAAGGATTTGATCCGGAAGTCAACTCTTATGGAACTCCGGGTAATTCGAATGATGACCGGAATATTTCATTGGGTGTGGATAACGGAGCTTACCCACAGTCAAAGATGATCATATTCGGAGTGAATTTTAATTTGAAGTAA
PROTEIN sequence
Length: 152
GSQGNKIFNAGRLEAEAMVNSANQSEAVINRWQKPGDITDMPGVSTNGSTNNSLISTRFLENGSYLRFKTITLSYEFDPKVLSGIGLRSATAYVSANNLFTVTKYKGFDPEVNSYGTPGNSNDDRNISLGVDNGAYPQSKMIIFGVNFNLK*