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scnpilot_p_inoc_scaffold_132248_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..607)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF687F related cluster n=1 Tax=unknown RepID=UPI0003CF687F similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 202.0
  • Bit_score: 368
  • Evalue 4.70e-99
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 202.0
  • Bit_score: 369
  • Evalue 7.80e-100
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 202.0
  • Bit_score: 369
  • Evalue 3.00e-99

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Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGCTCCAGCCCTGCCAGACATTCGAGCCTGCCGGCCTTTTCGCCCGTGACCTTGCCGAATGCCTGTCGCTCCAGCTCGCCGCGCGCGACCGGCTGGACCCCGCCATGAAGGCGCTGGTCGCCAATCTGGAGCTTCTGGCGCGCCGCGACTTTCAGTCGCTCAAGCGCATCTGCGGCGTCGACCAGGAGGACCTGCTCGACATGCTGGCTGAAATCCGCGCGCTCGACCCCCGGCCGGGAGCGGCGTTCTCCGGCGGCGCCAGCGACGCGGTGGTGGCCGATGTCGAGGTGCGCGCGGCTAATGACGGCAGCTGGGTGGTGGAACTCAACGCCGAGACGCTGCCGCGCGTGCTGGTCGACCAGATCTACTACGCCCAGGTCTCGCCGCATGCGAAGAGCCAGGAGGAGAAGGATTTCCTGGCCGAATGCCTGCAGAGCGCCAATTGGCTGACGCGCAGCCTGGACCAGAGGGCCAAGACGATCCTCAAGGTGGCCTCCGAGATCGTGCGCCAGCAGGATGCGTTTCTCGTCCATGGCGTGCGCCACCTGAGGCCACTCAACCTGCGCACCGTGGCTGATGCCATCGGCATGCACGAATCGACCGTC
PROTEIN sequence
Length: 202
VLQPCQTFEPAGLFARDLAECLSLQLAARDRLDPAMKALVANLELLARRDFQSLKRICGVDQEDLLDMLAEIRALDPRPGAAFSGGASDAVVADVEVRAANDGSWVVELNAETLPRVLVDQIYYAQVSPHAKSQEEKDFLAECLQSANWLTRSLDQRAKTILKVASEIVRQQDAFLVHGVRHLRPLNLRTVADAIGMHESTV