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scnpilot_p_inoc_scaffold_132248_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(558..1067)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCQ6_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 146.0
  • Bit_score: 247
  • Evalue 1.00e-62
RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 146.0
  • Bit_score: 247
  • Evalue 2.90e-63
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 146.0
  • Bit_score: 247
  • Evalue 1.40e-62

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ACCATGGCACTGGCGGCAAAACTACAGCTACGACAGTCGCAGTCGCTGGTCATGACGCCGCAGCTGATGCAGTCGATCCGGCTGCTGCAGCTCACCCATGCCGAACTCGAGCAGTTCATCGACGACGAGATCGAGCGCAATCCGCTGCTGGAGCGGGCCGAGCCGCAGGACGACGCGGCGAGCGACCAGGCGCAGAAGGCCGAACCCGCGCCGGAGGCATCCGCGGCGGAAGGCGACTGGTTCGAGAGCGAGGCGGCTTGGAGCGCCGAGGCCATCTCCGACAAGCTCGATACGTCGCTGGAGAACCTGTTTCCCGACGATCCAGGCACCAGCGAACGGCTGGGACCGGATTTGAGCGCGCAGTGGAAATCGGCCTCCGGCCACGGCGCCGGCCCAGCAGCTGAAGGGTTCGATCCGGGCGACATGGCGGTGGCCGCAGTTCGCCGGCCAGGTGGCCGAGGTGCTCCAGCCCTGCCAGACATTCGAGCCTGCCGGCCTTTTCGCCCGTGA
PROTEIN sequence
Length: 170
TMALAAKLQLRQSQSLVMTPQLMQSIRLLQLTHAELEQFIDDEIERNPLLERAEPQDDAASDQAQKAEPAPEASAAEGDWFESEAAWSAEAISDKLDTSLENLFPDDPGTSERLGPDLSAQWKSASGHGAGPAAEGFDPGDMAVAAVRRPGGRGAPALPDIRACRPFRP*