ggKbase home page

scnpilot_p_inoc_scaffold_193

Search features with annotation key words

Displaying items 31-60 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_193_31
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(33448..35703)
DNA (2256bp) protein (752aa)
Putative uncharacterized protein (Fragment) id=7718617 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
outer membrane protein Tax=GWF2_RIF_IGX_33_9_curated
surface antigen (D15)
scnpilot_p_inoc_scaffold_193_32
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35837..36076)
DNA (240bp) protein (80aa)
hypothetical protein id=7718616 bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01714.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_193_33
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36245..36940)
DNA (696bp) protein (232aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] id=7718615 bin=BACIGN_2 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
scnpilot_p_inoc_scaffold_193_34
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(37045..39729)
DNA (2685bp) protein (895aa)
hypothetical protein id=7718614 bin=BACIGN_2 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_193_35
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(39865..43074)
DNA (3210bp) protein (1070aa)
hypothetical protein id=7718613 bin=BACIGN_2 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_193_36
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

43110..44918
DNA (1809bp) protein (603aa)
id=7718612 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718612 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
scnpilot_p_inoc_scaffold_193_37
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(44930..46471)
DNA (1542bp) protein (514aa)
hypothetical protein id=7718611 bin=BACIGN_2 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_193_38
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

46476..48704
DNA (2229bp) protein (743aa)
Outer membrane receptor protein; K02014 iron complex outermembrane recepter protein id=7718610 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
Outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AFH49493.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavi
scnpilot_p_inoc_scaffold_193_39
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(48717..50039)
DNA (1323bp) protein (441aa)
hypothetical protein id=7718609 bin=BACIGN_2 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RBG_16_Ignavibacteria_36_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_193_40
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(50126..51256)
DNA (1131bp) protein (377aa)
mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=7718608 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase
scnpilot_p_inoc_scaffold_193_41
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(51281..52666)
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=7718607 bin=BACIGN_2 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
murF; UDP-N-acetylmuramyl-tripeptide synthetase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
scnpilot_p_inoc_scaffold_193_42
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(52717..53628)
DNA (912bp) protein (304aa)
S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] id=7718606 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Putative S-adenosylmethionine-dependent methyltransferase; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
S-adenosyl-methyltransferase MraW
scnpilot_p_inoc_scaffold_193_43
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(53628..54359)
DNA (732bp) protein (244aa)
hypothetical protein id=7718605 bin=BACIGN_2 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
lmbe family protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_193_44
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54356..54799)
DNA (444bp) protein (148aa)
ribose 5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=7718604 bin=BACIGN_2 species=alpha proteobacterium JLT2015 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EMD82179.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
scnpilot_p_inoc_scaffold_193_45
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(54796..55248)
DNA (453bp) protein (151aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=7718603 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
scnpilot_p_inoc_scaffold_193_46
Capnocytophaga sp. oral taxon 329, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55267..55953)
DNA (687bp) protein (229aa)
ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] id=7718602 bin=BACIGN_2 species=Capnocytophaga sp. oral taxon 329 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
ribonuclease H (EC:3.1.26.4)
Putative ribonuclease H {ECO:0000313|EMBL:KHE68833.1}; TaxID=706436 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp.
scnpilot_p_inoc_scaffold_193_47
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

55983..57527
DNA (1545bp) protein (515aa)
Putative chaperone; K07391 magnesium chelatase family protein id=7718601 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
Putative chaperone; K07391 magnesium chelatase family protein Tax=GWF2_RIF_IGX_33_9_curated
Mg chelatase-related protein
scnpilot_p_inoc_scaffold_193_48
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(57649..57864)
DNA (216bp) protein (72aa)
id=7718600 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718600 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_49
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

comp(57902..58822)
DNA (921bp) protein (307aa)
rfbD; dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=7718599 bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:BAL52516.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
dTDP-4-dehydrorhamnose reductase
scnpilot_p_inoc_scaffold_193_50
Brevibacillus brevis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(58848..59444)
DNA (597bp) protein (199aa)
transcriptional regulator id=7718598 bin=BACIGN_2 species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAH44291.1}; TaxID=358681 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus brevis (stra
scnpilot_p_inoc_scaffold_193_51
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

59580..60014
DNA (435bp) protein (145aa)
DoxX family protein; K15977 putative oxidoreductase id=7718597 bin=BACIGN_2 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
DoxX family protein Tax=GWA1_Bdellovibrionales_52_35_curated
DoxX family protein
scnpilot_p_inoc_scaffold_193_52
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59975..60400)
DNA (426bp) protein (142aa)
putative lactoylglutathione lyase; K07032 id=7718596 bin=BACIGN_2 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
putative lactoylglutathione lyase
Putative lactoylglutathione lyase {ECO:0000313|EMBL:AEV26631.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae
scnpilot_p_inoc_scaffold_193_53
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

60608..60979
DNA (372bp) protein (124aa)
id=7718595 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KIF31263.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
scnpilot_p_inoc_scaffold_193_54
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

61007..61204
DNA (198bp) protein (66aa)
id=7718594 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718594 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_55
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61314..61613
DNA (300bp) protein (100aa)
ArsR family transcriptional regulator (fragment) id=7718593 bin=BACIGN_2 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:EKS36983.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
scnpilot_p_inoc_scaffold_193_56
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61903..62631)
DNA (729bp) protein (243aa)
peroxidase (EC:1.11.1.7) id=7718592 bin=BACIGN_2 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
peroxidase
Peroxidase {ECO:0000313|EMBL:AJR04397.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthinifaciens CC-
scnpilot_p_inoc_scaffold_193_57
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

62714..64939
DNA (2226bp) protein (742aa)
peptidase S8/S53 subtilisin kexin sedolisin (EC:3.4.21.96) id=7718591 bin=BACIGN_2 species=Prevotella stercorea genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_193_58
Leptospira terpstrae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

64965..65546
DNA (582bp) protein (194aa)
DNA-3-methyladenine glycosylase i (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] id=7718590 bin=BACIGN_2 species=Leptospira terpstrae genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP rbh
DNA-3-methyladenine glycosylase i (EC:3.2.2.20)
Methyladenine glycosylase {ECO:0000313|EMBL:EMY60865.1}; TaxID=1257025 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira terpstrae serovar Hualin str. LT
scnpilot_p_inoc_scaffold_193_59
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

65651..66079
DNA (429bp) protein (143aa)
hypothetical protein id=7718589 bin=BACIGN_2 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KFF14948.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_p_inoc_scaffold_193_60
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(66289..68022)
DNA (1734bp) protein (578aa)
id=7718588 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718588 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
Displaying items 31-60 of 169 in total

View Taxonomy