ggKbase home page

scnpilot_p_inoc_scaffold_193

Search features with annotation key words

Displaying items 61-90 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_193_61
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

68269..68691
DNA (423bp) protein (141aa)
OsmC family protein; K04063 osmotically inducible protein OsmC id=7718587 bin=BACIGN_2 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:EHQ27859.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucil
OsmC family protein
scnpilot_p_inoc_scaffold_193_62
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68760..69536
DNA (777bp) protein (259aa)
hypothetical protein; K07074 id=7718586 bin=BACIGN_2 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein; K07074 Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
putative nucleotidyltransferase
scnpilot_p_inoc_scaffold_193_63
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(69621..70112)
DNA (492bp) protein (164aa)
hypothetical protein id=7718585 bin=BACIGN_2 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
ATPase {ECO:0000313|EMBL:KKG08886.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina
scnpilot_p_inoc_scaffold_193_64
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(70217..70819)
DNA (603bp) protein (201aa)
ArsR family transcriptional regulator id=7718584 bin=BACIGN_2 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACT96588.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_193_65
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(71003..71584)
DNA (582bp) protein (194aa)
ankyrin id=7718583 bin=BACIGN_2 species=Thermofilum pendens genus=Thermofilum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=BACIGN_2 organism_group=Unknown_CP rbh
ankyrin
Ankyrin {ECO:0000313|EMBL:ABL78682.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
scnpilot_p_inoc_scaffold_193_66
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71717..72967)
DNA (1251bp) protein (417aa)
id=7718582 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
Uncharacterized protein {ECO:0000313|EMBL:KIG14588.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
scnpilot_p_inoc_scaffold_193_67
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

73109..73651
DNA (543bp) protein (181aa)
hypothetical protein id=7718581 bin=BACIGN_2 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
3-demethylubiquinone-9 3-methyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
scnpilot_p_inoc_scaffold_193_68
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(73728..74702)
DNA (975bp) protein (325aa)
AraC family transcriptional regulator id=7718580 bin=BACIGN_2 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KGO81518.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_193_69
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

74838..75416
DNA (579bp) protein (193aa)
bifunctional deaminase-reductase domain-containing protein id=7718579 bin=BACIGN_2 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:AEW03424.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
scnpilot_p_inoc_scaffold_193_70
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75627..77147
DNA (1521bp) protein (507aa)
major facilitator superfamily protein; K08167 MFS transporter, DHA2 family, methyl viologen resistance protein SmvA id=7718578 bin=BACIGN_2 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
Sugar phosphate permease {ECO:0000313|EMBL:EJL77420.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_193_71
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77226..77603
DNA (378bp) protein (126aa)
hypothetical protein id=7718577 bin=BACIGN_2 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KHQ49842.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. U
hypothetical protein
scnpilot_p_inoc_scaffold_193_72
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

77714..78148
DNA (435bp) protein (145aa)
id=7718576 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718576 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_73
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(78152..78526)
DNA (375bp) protein (125aa)
hypothetical protein id=7718575 bin=BACIGN_2 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:EDY19337.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
scnpilot_p_inoc_scaffold_193_74
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78674..79012
DNA (339bp) protein (113aa)
glyoxalase/bleomycin resistance protein/dioxygenase id=7718574 bin=BACIGN_2 species=Gordonia rhizosphera genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:GAB91081.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
glyoxalase/bleomycin resistance protein/dioxygenase
scnpilot_p_inoc_scaffold_193_75
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79015..79533
DNA (519bp) protein (173aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] id=7718573 bin=BACIGN_2 species=Gluconacetobacter diazotrophicus genus=Gluconacetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
pat; phosphinothricin N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACI50980.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gl
scnpilot_p_inoc_scaffold_193_76
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79633..80325
DNA (693bp) protein (231aa)
winged helix family two component transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR id=7718572 bin=BACIGN_2 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEE48337.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Halisco
scnpilot_p_inoc_scaffold_193_77
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80325..81698
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Hal
integral membrane sensor signal transduction histidine kinase id=7718571 bin=BACIGN_2 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_193_78
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

81822..82322
DNA (501bp) protein (167aa)
hypothetical protein id=7718570 bin=BACIGN_2 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48335.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
scnpilot_p_inoc_scaffold_193_79
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(82497..83939)
DNA (1443bp) protein (481aa)
id=7718569 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718569 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_80
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

84046..87432
DNA (3387bp) protein (1129aa)
id=7718568 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718568 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_81
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(87526..88431)
DNA (906bp) protein (302aa)
id=7718567 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718567 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_82
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(88533..89492)
DNA (960bp) protein (320aa)
alcohol dehydrogenase id=7718566 bin=BACIGN_2 species=Gillisia limnaea genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
alcohol dehydrogenase Tax=GWB2_Bacteroidetes_41_8_curated
alcohol dehydrogenase
scnpilot_p_inoc_scaffold_193_83
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(89665..90378)
DNA (714bp) protein (238aa)
membrane protein id=7718565 bin=BACIGN_2 species=Flavobacterium sp. F52 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
membrane protein Tax=GWF1_Flavobacteria_32_7_curated
membrane protein
scnpilot_p_inoc_scaffold_193_84
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

90569..91021
DNA (453bp) protein (151aa)
id=7718564 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718564 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_85
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(91027..91182)
DNA (156bp) protein (52aa)
id=7718563 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718563 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_86
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

91435..91635
DNA (201bp) protein (67aa)
id=7718562 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718562 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_193_87
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

91759..92877
DNA (1119bp) protein (373aa)
RND family efflux transporter MFP subunit; K03585 membrane fusion protein id=7718561 bin=BACIGN_2 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB38959.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" sourc
scnpilot_p_inoc_scaffold_193_88
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

92904..96077
DNA (3174bp) protein (1058aa)
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=7718560 bin=BACIGN_2 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:AGA76820.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; E
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_p_inoc_scaffold_193_89
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

96077..97492
DNA (1416bp) protein (472aa)
NodT family RND efflux system outer membrane lipoprotein id=7718559 bin=BACIGN_2 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Outer-membrane efflux protein {ECO:0000313|EMBL:GAN31549.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" so
NodT family RND efflux system outer membrane lipoprotein
scnpilot_p_inoc_scaffold_193_90
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

97667..98251
DNA (585bp) protein (195aa)
hypothetical protein id=7718558 bin=BACIGN_2 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE51937.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
Displaying items 61-90 of 169 in total

View Taxonomy