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scnpilot_p_inoc_scaffold_564

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_564_1
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(1..510)
DNA (510bp) protein (170aa)
large secreted protein id=7718954 bin=BACIGN_2 species=Leptospira santarosai genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
large secreted protein id=7718954 bin=BACIGN_2 species=Leptospira santarosai genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_564_2
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(564..1442)
DNA (879bp) protein (293aa)
id=7718955 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718955 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_564_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2009..3937)
DNA (1929bp) protein (643aa)
histidine kinase id=7718956 bin=BACIGN_2 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:EHQ27255.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" so
histidine kinase
scnpilot_p_inoc_scaffold_564_4
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(3943..4368)
DNA (426bp) protein (142aa)
id=7718957 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=4316634 Tax=GWF2_RIF_IGX_33_9_curated
scnpilot_p_inoc_scaffold_564_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(4406..5371)
DNA (966bp) protein (322aa)
hypothetical protein id=7718958 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_564_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5368..5802)
DNA (435bp) protein (145aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] id=7718959 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
thioesterase family protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
thioesterase family protein
scnpilot_p_inoc_scaffold_564_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(5799..6776)
DNA (978bp) protein (326aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family id=7718960 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
parB-like partition protein
scnpilot_p_inoc_scaffold_564_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(6773..7582)
DNA (810bp) protein (270aa)
soj; SpoOJ regulator protein; K03496 chromosome partitioning protein id=7718961 bin=BACIGN_2 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
soj; SpoOJ regulator protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_564_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7690..14514)
DNA (6825bp) protein (2275aa)
hypothetical protein id=7718962 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
gliding motility-related protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_564_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

14734..17337
DNA (2604bp) protein (868aa)
Beta-galactosidase/beta-glucuronidase domain protein id=7718963 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
Beta-galactosidase/beta-glucuronidase domain protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
beta-galactosidase/beta-glucuronidase domain-containing protein
scnpilot_p_inoc_scaffold_564_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

17334..18401
DNA (1068bp) protein (356aa)
hrcA; Heat-inducible transcriptional repressor; K03705 heat-inducible transcriptional repressor id=7718964 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
hrcA; Heat-inducible transcriptional repressor; K03705 heat-inducible transcriptional repressor Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hrcA; Heat-inducible transcriptional repressor
scnpilot_p_inoc_scaffold_564_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

18470..19003
DNA (534bp) protein (178aa)
grpE; Molecular chaperone GrpE; K03687 molecular chaperone GrpE id=7718965 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
co-chaperone GrpE Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
grpE; Molecular chaperone GrpE
scnpilot_p_inoc_scaffold_564_13
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19006..20178
DNA (1173bp) protein (391aa)
dnaJ; Molecular chaperone DnaJ; K03686 molecular chaperone DnaJ id=7718966 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
chaperone protein DnaJ Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
chaperone protein DnaJ
scnpilot_p_inoc_scaffold_564_14
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20501..20674
DNA (174bp) protein (58aa)
competence protein comEA; K02237 competence protein ComEA id=7718967 bin=BACIGN_2 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
General secretion pathway protein K-like protein {ECO:0000313|EMBL:EGS31399.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Pepton
competence protein comEA
scnpilot_p_inoc_scaffold_564_15
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

20685..21548
DNA (864bp) protein (288aa)
id=7718968 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP rbh
id=7718968 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_564_16
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21550..22110
DNA (561bp) protein (187aa)
methyltransferase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] id=7718969 bin=BACIGN_2 species=Brevundimonas sp. BAL3 genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
methyltransferase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
methyltransferase
scnpilot_p_inoc_scaffold_564_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

22137..22622
DNA (486bp) protein (162aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] id=7718970 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
pantetheine-phosphate adenylyltransferase Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
pantetheine-phosphate adenylyltransferase
scnpilot_p_inoc_scaffold_564_18
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22619..23950
DNA (1332bp) protein (444aa)
Ribosomal protein S12P methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] id=7718971 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
2-methylthioadenine synthetase
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
scnpilot_p_inoc_scaffold_564_19
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23937..24473)
DNA (537bp) protein (179aa)
Uncharacterized protein id=7718972 bin=BACIGN_2 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH51655.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
scnpilot_p_inoc_scaffold_564_20
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(24473..25822)
DNA (1350bp) protein (450aa)
ATP-dependent hsl protease ATP-binding subunit hslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU id=7718973 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
ATP-dependent hsl protease ATP-binding subunit hslU
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_564_21
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(25819..26361)
DNA (543bp) protein (181aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=7718974 bin=BACIGN_2 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
ATP-dependent HslUV protease peptidase subunit Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ATP-dependent protease peptidase subunit
scnpilot_p_inoc_scaffold_564_22
BACIGN_2, BACIGN_2, BACIGN_2, BACIGN_2, Unknown_CP, Bacteria

Not on your lists

comp(26389..26745)
DNA (357bp) protein (119aa)
id=7718975 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
id=7718975 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
scnpilot_p_inoc_scaffold_564_23
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(26742..27437)
DNA (696bp) protein (232aa)
lipoprotein releasing system ATP-binding protein LolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=7718976 bin=BACIGN_2 species=Shewanella piezotolerans genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP rbh
lolD; outer membrane lipoproteins ABC transporter ATP-binding protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
scnpilot_p_inoc_scaffold_564_24
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(27437..28456)
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=7718977 bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP rbh
pheS; Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
pheS; phenylalanyl-tRNA synthetase subunit alpha
scnpilot_p_inoc_scaffold_564_25
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

comp(28505..30076)
DNA (1572bp) protein (524aa)
ABC transporter id=7718978 bin=BACIGN_2 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP rbh
ABC transporter ATPase Tax=GWF1_Spirochaetes_51_8_curated
ABC transporter
scnpilot_p_inoc_scaffold_564_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(30302..30649)
DNA (348bp) protein (116aa)
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=7718979 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
50S ribosomal protein L20
scnpilot_p_inoc_scaffold_564_27
Prevotella sp. CAG:1185, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(30750..30938)
DNA (189bp) protein (63aa)
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 id=7718980 bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; envi
scnpilot_p_inoc_scaffold_564_28
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(30952..31437)
DNA (486bp) protein (162aa)
translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=7718981 bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP rbh
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=GWF2_RIF_IGX_33_9_curated
translation initiation factor IF-3
scnpilot_p_inoc_scaffold_564_29
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

31703..34165
DNA (2463bp) protein (821aa)
lon; ATP-dependent Lon protease; K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=7718982 bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP rbh
lon; ATP-dependent Lon protease; K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
ATP-dependent Lon protease
scnpilot_p_inoc_scaffold_564_30
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


34262..34441
DNA (180bp) protein (60aa)
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=7718983 bin=BACIGN_2 species=unknown genus=unknown taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
rpmG; 50S ribosomal protein L33
Displaying items 1-30 of 52 in total

View Taxonomy