ggKbase home page

scnpilot_p_inoc_scaffold_655_3

Organism: SCNpilot_P_inoc_Kapabacteria_57_18

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 897..1370

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=7719058 bin=BACIGN_2 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 308
  • Evalue 3.40e-81
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 149.0
  • Bit_score: 103
  • Evalue 4.70e-20
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA42316.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fl similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 149.0
  • Bit_score: 103
  • Evalue 2.40e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 474
ATGCGACTCTATCGGCCGGTCCAGGAACGGGTGGAGCGGTTCGCCCTGCACCTGACGAGACACCGTCAGGACGCTCGTGAGCTCGTGGCCCAGACGTTGGCCACGGCATACGAAGGCATGGCAGGTATGCGGGACGAGGCGGCATTTCTCAGCTATCTGTTCACGATCGCACGGCGTACGTGGTATCACCAGCGCCGACGGCAACAGAGGGAAGTGGCGACGGCTCCCGAGGACCTGACGGTTCTCTTCGATGATGTCGATCCGTCCCTGCGGACGGAAGTCCGGTTGATCTACGAAGCGATGGAACGATTACCCGACGAACAACGCGAGGCACTGATTCTCTTCGAAGTGATGGGATTCCCGATCCACGATATCGCCAGGATGCAGGAAAGCACGGTCAGTGCCGTGAAGGTACGCCTGCATCGCGCCCGTCAAAGCGTCCGCGCCTCGATCAGGGAGGTGCCGAATGTCTGA
PROTEIN sequence
Length: 158
MRLYRPVQERVERFALHLTRHRQDARELVAQTLATAYEGMAGMRDEAAFLSYLFTIARRTWYHQRRRQQREVATAPEDLTVLFDDVDPSLRTEVRLIYEAMERLPDEQREALILFEVMGFPIHDIARMQESTVSAVKVRLHRARQSVRASIREVPNV*