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scnpilot_p_inoc_scaffold_3678

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3678_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..431)
DNA (429bp) protein (143aa)
magnesium transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000379F089
divalent cation transporter; K06213 magnesium transporter Tax=GWE1_Thiobacillus_62_9_curated
divalent cation transporter
scnpilot_p_inoc_scaffold_3678_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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802..936
DNA (135bp) protein (45aa)
ISRSO18-transposase protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQX4_THISH
Transposase {ECO:0000313|EMBL:GAO36982.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ISRSO18-transposase
scnpilot_p_inoc_scaffold_3678_3
unknown

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1099..1341
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3678_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1342..1914
DNA (573bp) protein (191aa)
hypothetical protein id=12497249 bin=THIO_MID species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF79747.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa s
scnpilot_p_inoc_scaffold_3678_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1911..5090
DNA (3180bp) protein (1060aa)
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YLB3_METFJ rbh
hemolysin-type calcium-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
scnpilot_p_inoc_scaffold_3678_6
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

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5087..10240
DNA (5154bp) protein (1718aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q1N7_9RHOO rbh
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3678_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10447..12576
DNA (2130bp) protein (710aa)
Protein-1 exporter id=1323110 bin=GWE1_T_denit_62_9 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
protein-1 exporter Tax=GWE1_Thiobacillus_62_9_curated
Type I secretion system ABC transporter, HlyB family
scnpilot_p_inoc_scaffold_3678_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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12587..14002
DNA (1416bp) protein (472aa)
hlyD; HlyD-family type I secretion protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
HlyD-family type I secretion protein id=1323113 bin=GWE1_T_denit_62_9 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hlyD; HlyD-family type I secretion protein
scnpilot_p_inoc_scaffold_3678_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14021..14701)
DNA (681bp) protein (227aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] Tax=GWE1_Thiobacillus_62_9_curated
peptidoglycan transglycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F4369
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
scnpilot_p_inoc_scaffold_3678_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14698..14910)
DNA (213bp) protein (71aa)
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
shikimate dehydrogenase (EC:1.1.1.25)
shikimate 5-dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003622F6A
Displaying 10 items

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