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scnpilot_p_inoc_scaffold_1800

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1800_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..467)
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=1361659 bin=GWE1_T_denit_62_9 species=Xanthomonas fuscans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1800_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(819..1868)
DNA (1050bp) protein (350aa)
Membrane protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAC8_9RHOO rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1800_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1894..2286)
DNA (393bp) protein (131aa)
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Uncharacterized protein id=1347803 bin=GWE1_T_denit_62_9 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
scnpilot_p_inoc_scaffold_1800_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2313..5456)
DNA (3144bp) protein (1048aa)
Heavy metal efflux pump, CzcA family id=1347804 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
CzcA family heavy metal efflux pump Tax=GWE1_Thiobacillus_62_9_curated
CzcA family heavy metal efflux pump
scnpilot_p_inoc_scaffold_1800_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5472..7043)
DNA (1572bp) protein (524aa)
Efflux transporter, RND family, MFP subunit id=1347805 bin=GWE1_T_denit_62_9 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
RND family efflux transporter MFP subunit Tax=GWE1_Thiobacillus_62_9_curated
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_1800_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7040..8248)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000377ED6F
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
outer membrane efflux protein
scnpilot_p_inoc_scaffold_1800_7
unknown

Not on your lists

8483..8815
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E0BF2
scnpilot_p_inoc_scaffold_1800_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8962..9297)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624EA5
putative metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:CAZ88065.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (st
scnpilot_p_inoc_scaffold_1800_9
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9303..12224)
DNA (2922bp) protein (974aa)
type I restriction-modification system, R subunit (EC:3.1.21.3) rbh
Type I restriction-modification system, R subunit {ECO:0000313|EMBL:ACK79055.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ACK79055.1};; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidit
Type I site-specific deoxyribonuclease, HsdR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPM1_ACIF5 rbh
scnpilot_p_inoc_scaffold_1800_10
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12227..13525)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QI70_PSECO
Uncharacterized protein {ECO:0000313|EMBL:ESR01503.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlor
hypothetical protein
scnpilot_p_inoc_scaffold_1800_11
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(13522..14319)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WM87_VEREI rbh
hypothetical protein Tax=CG_Elusi_04
hypothetical protein
scnpilot_p_inoc_scaffold_1800_12
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(14316..15545)
DNA (1230bp) protein (410aa)
Restriction modification system DNA specificity domain n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3ELH4_CHLPB rbh
restriction modification system DNA specificity domain
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ACE03303.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Ch
scnpilot_p_inoc_scaffold_1800_13
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15542..16510)
DNA (969bp) protein (323aa)
type I restriction-modification system, M subunit (EC:2.1.1.72)
DNA methyltransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624E9E
DNA methyltransferase {ECO:0000313|EMBL:AIE17972.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfona
scnpilot_p_inoc_scaffold_1800_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17211..17495
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003671370
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
histone family protein DNA-binding protein
scnpilot_p_inoc_scaffold_1800_15
Thiobacillus sp. SCN2, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17572..17865
DNA (294bp) protein (98aa)
hypothetical protein id=12498594 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein id=12498594 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_1800_16

Not on your lists

18671..19612
DNA (942bp) protein (314aa)
Putative integrase n=1 Tax=uncultured bacterium RepID=I6ZME9_9BACT rbh
Putative integrase {ECO:0000313|EMBL:AFN66379.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1800_17

Not on your lists

19609..19911
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=I6YQ09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFN66378.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_1800_18
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20087..20296)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWJ7_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI10567.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
scnpilot_p_inoc_scaffold_1800_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20445..21290)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI81_THIDA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1800_20
unknown

Not on your lists

comp(21675..21944)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1800_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22571..22786
DNA (216bp) protein (72aa)
molecular chaperone GrpE n=1 Tax=Thiobacillus denitrificans RepID=UPI000376A7CD
molecular chaperone protein GrpE; K03687 molecular chaperone GrpE Tax=GWE1_Thiobacillus_62_9_curated
molecular chaperone protein GrpE
Displaying 21 items

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