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scnpilot_p_inoc_scaffold_47

Search features with annotation key words

Displaying items 241-270 of 426 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_47_241
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241505..243064
DNA (1560bp) protein (520aa)
IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:3.5.4.10 2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=12496439 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; H
scnpilot_p_inoc_scaffold_47_242
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

243158..244435
DNA (1278bp) protein (426aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] id=12496438 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=GWE1_Thiobacillus_62_9_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
scnpilot_p_inoc_scaffold_47_243
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244446..244994
DNA (549bp) protein (183aa)
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein id=12496437 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
translation factor SUA5
scnpilot_p_inoc_scaffold_47_244
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244994..245902
DNA (909bp) protein (303aa)
coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] id=12496436 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
coproporphyrinogen III oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] Tax=GWE1_Thiobacillus_62_9_curated
coproporphyrinogen III oxidase (EC:1.3.3.3)
scnpilot_p_inoc_scaffold_47_245
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245912..249124
DNA (3213bp) protein (1071aa)
transmembrane protein id=12496435 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98415.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
transmembrane protein
scnpilot_p_inoc_scaffold_47_246
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249185..250387
DNA (1203bp) protein (401aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-); K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] id=12496434 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
GAF sensor signal transduction histidine kinase (EC:2.7.3.-); K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] Tax=RIFOXYD1_FULL_Hydrogenophilales_6
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
scnpilot_p_inoc_scaffold_47_247
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

250384..251043
DNA (660bp) protein (220aa)
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL id=12496433 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_47_248
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

251089..251472
DNA (384bp) protein (128aa)
hypothetical protein id=12496432 bin=THIO_MID species=unknown genus=Methylophilus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_249
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252968..254515)
DNA (1548bp) protein (516aa)
AMP-dependent synthetase/ligase (EC:5.1.1.11) id=12496431 bin=THIO_MID species=Desulfovibrio sp. Dsv1 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
AMP-dependent synthetase/ligase (EC:5.1.1.11) Tax=GWA2_Gallionellales_60_142_curated
D-alanine--poly(phosphoribitol) ligase subunit 1
scnpilot_p_inoc_scaffold_47_250
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254527..255279)
DNA (753bp) protein (251aa)
3-ketoacyl-ACP reductase (EC:1.1.1.100) id=12496430 bin=THIO_MID species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
3-ketoacyl-ACP reductase (EC:1.1.1.100) Tax=GWA2_Gallionellales_60_142_curated
3-ketoacyl-(acyl-carrier-protein) reductase
scnpilot_p_inoc_scaffold_47_251
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255276..255503)
DNA (228bp) protein (76aa)
acyl carrier protein id=12496429 bin=THIO_MID species=Aeromonas veronii genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWA2_Gallionellales_60_142_curated
acyl carrier protein
scnpilot_p_inoc_scaffold_47_252
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255537..256643)
DNA (1107bp) protein (369aa)
hypothetical protein id=12496428 bin=THIO_MID species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWA2_Gallionellales_60_142_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_253

Not on your lists

comp(256649..257665)
DNA (1017bp) protein (339aa)
methyltransferase type 11 id=12496427 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria rbh
Putative Methyltransferase type 11 {ECO:0000313|EMBL:CBH74083.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Type 11 methyltransferase (modular protein)
scnpilot_p_inoc_scaffold_47_254

Not on your lists

257820..258518
DNA (699bp) protein (233aa)
hexapaptide repeat-containing transferase id=12496426 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria rbh
Putative Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:CBH74080.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage met
hexapaptide repeat-containing transferase
scnpilot_p_inoc_scaffold_47_255
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

258528..259487
DNA (960bp) protein (320aa)
hypothetical protein id=12496425 bin=THIO_MID species=Vibrio genomosp. F10 genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RBG_13_Ignavibacteria_36_8_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_256
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259496..260206)
DNA (711bp) protein (237aa)
hypothetical protein id=12496424 bin=THIO_MID species=Shewanella sediminis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV37601.1}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis
scnpilot_p_inoc_scaffold_47_257
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260203..261159)
DNA (957bp) protein (319aa)
hypothetical protein id=12496423 bin=THIO_MID species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KHA77807.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacter
hypothetical protein
scnpilot_p_inoc_scaffold_47_258

Not on your lists

comp(261156..262280)
DNA (1125bp) protein (375aa)
vioA; DegT/DnrJ/EryC1/StrS family aminotransferase id=12496422 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD55267.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Aminotransferase, DegT/DnrJ/EryC1/StrS family
scnpilot_p_inoc_scaffold_47_259
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(262277..265018)
DNA (2742bp) protein (914aa)
hypothetical protein id=12496421 bin=THIO_MID species=Methylobacter sp. UW 659-2-H10 genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=CG_Hydro_01
tetratricopeptide repeat family protein
scnpilot_p_inoc_scaffold_47_260
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265148..265924)
DNA (777bp) protein (259aa)
outer membrane protein id=12496420 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
outer membrane protein Tax=GWE1_Thiobacillus_62_9_curated
outer membrane protein
scnpilot_p_inoc_scaffold_47_261
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266036..266839)
DNA (804bp) protein (268aa)
hypothetical protein id=12496419 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_262
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266841..268280)
DNA (1440bp) protein (480aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] id=12496418 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] Tax=
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
scnpilot_p_inoc_scaffold_47_263
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268283..268612)
DNA (330bp) protein (110aa)
hypothetical protein id=12496417 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98425.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_p_inoc_scaffold_47_264
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268633..270039)
DNA (1407bp) protein (469aa)
hydrogenobyrinic acid a,c-diamide synthase / cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-); K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] id=12496416 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hydrogenobyrinic acid a,c-diamide synthase / cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-); K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=GWE1_Thiobacillus_62_9_curated
hydrogenobyrinic acid a,c-diamide synthase / cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-)
scnpilot_p_inoc_scaffold_47_265
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(270075..271277)
DNA (1203bp) protein (401aa)
molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] id=12496415 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=GWE1_Thiobacillus_62_9_curated
molybdopterin oxidoreductase, membrane subunit
scnpilot_p_inoc_scaffold_47_266
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(271283..272062)
DNA (780bp) protein (260aa)
iron-sulfur cluster protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=12496414 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
iron-sulfur cluster protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=GWE1_Thiobacillus_62_9_curated
iron-sulfur cluster protein
scnpilot_p_inoc_scaffold_47_267
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272059..272541)
DNA (483bp) protein (161aa)
hypothetical protein id=12496413 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_47_268
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272547..274508)
DNA (1962bp) protein (654aa)
putative glutamate synthase (NADPH) small subunit id=12496412 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
glutamate synthase (NADPH) small subunit
Iron-sulfur cluster-binding protein, GltD family {ECO:0000313|EMBL:AAZ98430.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
scnpilot_p_inoc_scaffold_47_269
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274558..276099)
DNA (1542bp) protein (514aa)
reductase, iron-sulfur binding subunit id=12496411 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
reductase, iron-sulfur binding subunit Tax=GWE1_Thiobacillus_62_9_curated
reductase, iron-sulfur binding subunit
scnpilot_p_inoc_scaffold_47_270
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276153..276872)
DNA (720bp) protein (240aa)
putative DsrM protein id=12496410 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
DsrM protein
Putative DsrM protein {ECO:0000313|EMBL:AAZ98432.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus den
Displaying items 241-270 of 426 in total

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