ggKbase home page

scnpilot_p_inoc_scaffold_318

Search features with annotation key words

Displaying items 91-120 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_318_91
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81017..81355)
DNA (339bp) protein (113aa)
hypothetical protein id=12496816 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_318_92
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81398..81802)
DNA (405bp) protein (135aa)
hypothetical protein id=12496815 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97947.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_p_inoc_scaffold_318_93
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81964..82344
DNA (381bp) protein (127aa)
putative transmembrane protein id=12496814 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative transmembrane protein Tax=GWE1_Thiobacillus_62_9_curated
transmembrane protein
scnpilot_p_inoc_scaffold_318_94
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82351..82779
DNA (429bp) protein (143aa)
hypothetical protein id=12496813 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_318_95
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82781..83599)
DNA (819bp) protein (273aa)
signaling protein id=12496812 bin=THIO_MID species=Thioalkalivibrio sp. ALgr3 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
signaling protein
scnpilot_p_inoc_scaffold_318_96
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(83596..85260)
DNA (1665bp) protein (555aa)
putative ATPase id=12496811 bin=THIO_MID species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
PAS domain-containing protein Tax=RBG_16_Planctomycetes_64_10_curated
putative ATPase
scnpilot_p_inoc_scaffold_318_97
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85371..85790
DNA (420bp) protein (140aa)
hypothetical protein id=12496810 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_318_98
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85795..87186
DNA (1392bp) protein (464aa)
oxidoreductase, FAD-binding; K03777 D-lactate dehydrogenase [EC:1.1.1.28] id=12496809 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
oxidoreductase, FAD-binding; K03777 D-lactate dehydrogenase [EC:1.1.1.28] Tax=GWE1_Thiobacillus_62_9_curated
oxidoreductase, FAD-binding
scnpilot_p_inoc_scaffold_318_99
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87339..87524
DNA (186bp) protein (62aa)
hypothetical protein id=12496808 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_scaffold_318_100
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87898..89373
DNA (1476bp) protein (492aa)
hypothetical protein id=12496807 bin=THIO_MID species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_p_inoc_scaffold_318_101
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89702..90235
DNA (534bp) protein (178aa)
peroxiredoxin-like protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] id=12496806 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
peroxiredoxin-like protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
peroxiredoxin-like protein
scnpilot_p_inoc_scaffold_318_102
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

90296..91504
DNA (1209bp) protein (403aa)
diguanylate cyclase/phosphodiesterase id=12496805 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_318_103
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91565..95368)
DNA (3804bp) protein (1268aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] id=12496804 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AAZ97961.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacill
scnpilot_p_inoc_scaffold_318_104
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95414..96097)
DNA (684bp) protein (228aa)
integral membrane protein id=12496803 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
integral membrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_318_105
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96129..96881
DNA (753bp) protein (251aa)
hypothetical protein; K07039 uncharacterized protein id=12496802 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein; K07039 uncharacterized protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_318_106
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96898..97560
DNA (663bp) protein (221aa)
phosphoserine phosphatase (EC:3.1.3.3) id=12496801 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
phosphoserine phosphatase (EC:3.1.3.3) Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
phosphoserine phosphatase (EC:3.1.3.3)
scnpilot_p_inoc_scaffold_318_107
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97562..98521
DNA (960bp) protein (320aa)
hypothetical protein id=12496800 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97966.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_p_inoc_scaffold_318_108
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98606..99610
DNA (1005bp) protein (335aa)
Helix-turn-helix type 11 domain-containing protein id=12496799 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAO81056.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacter
scnpilot_p_inoc_scaffold_318_109
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99620..102280
DNA (2661bp) protein (887aa)
CRISPR-associated helicase Cas3; K07012 id=12496798 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Predicted helicase {ECO:0000313|EMBL:BAO81055.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
predicted helicase
scnpilot_p_inoc_scaffold_318_110
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102654..104168
DNA (1515bp) protein (505aa)
Cse1 family CRISPR-associated protein id=12496797 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
cse1; CRISPR/Cas system-associated protein Cse1 rbh
CRISPR/Cas system-associated protein Cse1 {ECO:0000313|EMBL:BAO81054.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae
scnpilot_p_inoc_scaffold_318_111
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104165..104617
DNA (453bp) protein (151aa)
Cse2 family CRISPR-associated protein id=12496796 bin=THIO_MID species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81053.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
scnpilot_p_inoc_scaffold_318_112
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104620..105747
DNA (1128bp) protein (376aa)
CRISPR-associated protein Cse4 id=12496795 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
cas7; CRISPR/Cas system-associated RAMP superfamily protein Cas7
CRISPR/Cas system-associated RAMP superfamily protein Cas7 {ECO:0000313|EMBL:BAO81052.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source
scnpilot_p_inoc_scaffold_318_113
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105788..106432
DNA (645bp) protein (215aa)
Cas5 family CRISPR-associated protein id=12496794 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81051.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
scnpilot_p_inoc_scaffold_318_114
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106423..107046
DNA (624bp) protein (208aa)
Cse3 family CRISPR-associated protein id=12496793 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81050.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
scnpilot_p_inoc_scaffold_318_115
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107110..107391
DNA (282bp) protein (94aa)
hypothetical protein id=12496792 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE2_Gallionellales_58_10_curated
prevent-host-death protein
scnpilot_p_inoc_scaffold_318_116
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107388..107687
DNA (300bp) protein (100aa)
plasmid stabilization system id=12496791 bin=THIO_MID species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
plasmid stabilization system Tax=GWE2_Gallionellales_58_10_curated
plasmid stabilization system
scnpilot_p_inoc_scaffold_318_117
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107687..108607
DNA (921bp) protein (307aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
cas1; CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1 id=12496790 bin=THIO_MID species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=THIO_MID organism_group=Betaproteobacteria rbh
cas1; CRISPR/Cas system-associated protein Cas1
scnpilot_p_inoc_scaffold_318_118
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108588..108884
DNA (297bp) protein (99aa)
cas2; CRISPR-associated protein Cas2 id=12496789 bin=THIO_MID species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=THIO_MID organism_group=Betaproteobacteria
cas2; CRISPR/Cas system-associated protein Cas2
CRISPR/Cas system-associated protein Cas2 {ECO:0000313|EMBL:BAO81046.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae
scnpilot_p_inoc_scaffold_318_119
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109673..110479)
DNA (807bp) protein (269aa)
hypothetical protein id=12496788 bin=THIO_MID species=Acidiphilium sp. PM genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EGO93873.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein
scnpilot_p_inoc_scaffold_318_120
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111045..112211)
DNA (1167bp) protein (389aa)
hypothetical protein id=12496787 bin=THIO_MID species=Acidiphilium sp. PM genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EGO93873.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp
hypothetical protein
Displaying items 91-120 of 223 in total

View Taxonomy