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scnpilot_p_inoc_scaffold_47_152

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 154534..155013

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=12496528 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 325
  • Evalue 2.80e-86
  • rbh
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 159.0
  • Bit_score: 268
  • Evalue 1.10e-69
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Th similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 159.0
  • Bit_score: 268
  • Evalue 5.60e-69

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGGGCGTGTCGCCGCCCCGTTCGGTATCAAGGGCTGGGTCAAGGTTCAGCCCTATAGCGAAGACCCGGGTGCGTTGATGGATTTCGAATCCTGGCGTGTCGGACGCGGCGAACTGCACAGGCAGTACACGGTCGAGTCCATCCAGGACCATGGTGCCGCCCTGGTCGCGAAACTGGCTGGCGTCGACGACCGCGATGCGGCATATGCCCTGCGCGGACAGGAGGTTTCGGTAGCCCGGGCAGACCTCCCGAGCCCGGAGGACAACGCGTTTTACTGGTCGGACCTGATCGGATTGACCGTTTTCAACCGTGAAGGAGTGGAACTGGGGCGGATTGCGAGCCTGATGGAAACCGGCGCCCACGACGTGCTGGTGGTCAGGGGCCGCCGCGAATACCTGATCCCCTTCGTTGCCGCCATTGTCGGTACGGTGGATATGGCGGGCGGCCGGCTAGAGGTCGACTGGGGCGAGGACTGGTGA
PROTEIN sequence
Length: 160
MGRVAAPFGIKGWVKVQPYSEDPGALMDFESWRVGRGELHRQYTVESIQDHGAALVAKLAGVDDRDAAYALRGQEVSVARADLPSPEDNAFYWSDLIGLTVFNREGVELGRIASLMETGAHDVLVVRGRREYLIPFVAAIVGTVDMAGGRLEVDWGEDW*