ggKbase home page

scnpilot_p_inoc_scaffold_1949_4

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 1248..1679

Top 3 Functional Annotations

Value Algorithm Source
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=12498637 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 144.0
  • Bit_score: 281
  • Evalue 5.40e-73
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 143.0
  • Bit_score: 278
  • Evalue 6.30e-72
rplK; 50S ribosomal protein L11 similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 143.0
  • Bit_score: 276
  • Evalue 4.80e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGGCAAAGAAAATTGTCGGCTACATCAAGCTGCAAGTGCCGGCGGGCAAGGCGAACCCTTCGCCGCCCATCGGGCCCGCGCTCGGCCAGCGCGGCCTGAACATCATGGAATTCTGCAAGGCGTTCAACGCCAAGACCCAGAGCATGGAGCCGGGTCTGCCGATTCCCGTCGTGATCACGGCGTTCGCGGACAAGAGCTTCACCTTCGTGATGAAGACGCCGCCCGCGACGGTGCTCATCAAGAAGGCGATCAAGCTCGACAAGGGCAGTGCCAAACCGCACGTGGACAAGGTCGGTACGATCACCCGCGCACAGCTGGAAGAAATCGCCAAGACCAAGGAACCCGACCTGACCGCGGCCGACATGGATGCCGCGGTGCGCACCATCGCCGGTACCGCGCGTTCCATGGGCATCATCGTGGAGGGCGTCTGA
PROTEIN sequence
Length: 144
MAKKIVGYIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAKTQSMEPGLPIPVVITAFADKSFTFVMKTPPATVLIKKAIKLDKGSAKPHVDKVGTITRAQLEEIAKTKEPDLTAADMDAAVRTIAGTARSMGIIVEGV*