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scnpilot_p_inoc_scaffold_1949_9

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 7913..12112

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=12498641 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2690
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 999.99
  • Bit_score: 2611
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 999.99
  • Bit_score: 2611
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4200
ATGAAAGCACTGTTGGATCTGTTCAAGCAGGCCACCCACGAGGAAGAGTTCGACGCCATCAAGATCGGCCTGGCGTCGCCGGAAAAAATCCGTTCCTGGTCGTACGGCGAGGTCAAGAAGCCCGAGACCATCAACTACCGGACCTTCAAGCCCGAGCGCGATGGCCTGTTCTGCGCGAAGATCTTCGGCCCGGTGAAGGACTACGAGTGCTTGTGCGGCAAGTACAAGCGCCTCAAACACCGCGGTGTGATCTGCGAGAAGTGCGGGGTGGAAGTCACGCTGTCGAAAGTGCGCCGCGAGCGCATGGGCCACATCGAACTGGCCAGCCCGGTTGCCCATATCTGGTTCCTGAAGTCGCTGCCGTCACGTCTGGGCATGGTGCTCGACATGACGCTGCGCGATATCGAGCGCGTGCTGTACTTCGAAGGCTTCGTCGTCGTCGAGCCCGGCATGACCCCGTTGAACAAGGGCCAGTTGCTGACCGAAGAGGACTATCTCAACAAGCTCGAGGAATACGGTGACGAATTCCGTGCGCTGATGGGCGCGGAAGCCATCCGCGAACTGCTGCGCGGCATCGACCTGCACACCGAAGTCGAATCGCTGCATGCCGAAATCGGCAAGACCGGTTCGGACACCAAGCTCAAGAAGCTGTCGAAACGTCTGAAAATCCTGGAAGGCTTCCAGAAGTCCGGCATCAAGCCCGAGTGGATGATTCTCGAAGTATTGCCGGTGCTGCCGCCCGAGCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGTTTCGCGACCTCGGACCTGAACGACCTGTATCGCCGCGTCATCAACCGCAATAACCGCCTGAAGCGCCTGCTGGAGCTTAAGGCCCCGGAAATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCTGTCGACTCGCTGCTCGACAACGGCCGTCGCGGCAAGGCAATGACCGGCGCCAACAAGCGCCCACTGAAGTCGCTGGCCGACATGATCAAGGGCAAGAGCGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGATTACTCCGGCCGTTCGGTCATCGTAGTGGGTCCGACGCTGAAGCTGCACCAGTGCGGCCTGCCGAAAAAGATGGCGCTCGAACTCTTCAAACCCTTCATCTTCAACCGCCTCGAAGTGCTGGGGCTGGCGACCACGATCAAGGCCGCCAAGAAGATGGTGGAGGACGAAGAACCGATCGTCTGGGATCTGCTGGAAGAAGTCATCCGCGAGCATCCGGTGATGCTGAACCGTGCGCCGACGCTGCACCGTCTGGGCATCCAGGCGTTCGAACCGGTGCTGATCGAAGGCAAGGCAATCCAGCTGCACCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTTCACGTACCGCTGTCGCTGGAAGCCCAGACCGAAGCCCGCACCCTGATGCTGGCGTCGAACAACGTGCTGTCGCCCGCCAACGGCGAACCCATCATCGTTCCCTCGCAGGACATCGTGCTGGGTCTGTATTACATGACGCGCGAAATGGTGAACGCGAAGGGCGAAGGCATGGTATTCGCCGACGTCGCCGAGGCCCGGCGCGCCTACGACAACCGTGTGGCCGACCTGCATGCGCGCGTGACCGTGCGCATCAAGGAGGTGACGCTCGACGAGAACAAGAACCGCGTCGAGACGATCAAGCGTGTGGAAACCACGCTGGGTCGTTCGCTGCTGTCCGAAATCCTGCCGCCCGGCCTTCCGTTCAGCCATGTCGACAAGGCGCTGAAGAAAAAGGAAATCTCCAAGCTCATCAACGCCAGCTTCCGCCGCTGCGGCCTGCGCGAGACCGTGATCTTCGCCGACAAGCTGATGTACACCGGCTTCACGTTCGCAACCCGTGCCGGCATGTCGATCGCGATCAAGGACATGCTGATTCCGGGCGAGAAGGACCAGATCCTCGGCGCCGCCGAAGCCGAGGTGAAGGAAATCGAGTCGCAGTACACCTCGGGTCTGGTGACCCAGGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGGCCGGGCCGGCGACGCCGTGGCCAAGGCCATGATGGCGCAACTGGGCGGCGAGAAGGTGACCGACCGTGCCGGCAAGGAAGTGACGCAGGAATCGTTCAACGCGATCTACATGATGGCCGACTCCGGCGCGCGCGGGTCCGCTGCACAGATTCGTCAGCTCGCCGGCATGCGCGGCCTGATGGCCAAACCGGACGGCTCGATCATCGAAACGCCGATCACGGCGAACTTCCGCGAAGGCCTGAACATGCTTCAGTACTTCATCTCGACACACGGTGCACGTAAGGGCCTTGCCGATACCGCGCTGAAGACCGCGAACTCGGGTTACCTGACCCGCCGTCTGGTCGACGTGACGCAGGATCTGGTGGTGGTCGAGGACGATTGCGGCACCAAGAACGGCCTGGCGGTGAAGGCCCTGGTCGAAGGCGGCGAGGTCGTCGAGCCGCTGCGCGAGCGGATTCTCGGCCGCGTGGCTGCTTCGGACATCATCCATCCGGAATCTCAGGAAACCGTCTACGAAGCCGGGACGCTGCTGTCCGAAGACGTGGTCGACACCATCGAGGCGCTGGGCATCGACGAGGTCAAGGTGCGTACCCCACTGACCTGCGAAACGCGCTATGGCCTGTGCGCCAAGTGCTATGGCCGCGATCTCGGACGCGGCTATCTGGTCAATGCCGGCGAGGCGGTAGGGGTGATCGCCGCGCAGTCCATCGGCGAACCGGGCACGCAGCTGACCATGCGGACCTTCCACATCGGCGGCGCGGCCTCGCGTGCGGCGGCAGCCAGCCAGCTGGAAGCCAAGTCGAACGGCACGGTGCAATACACCGCGGCGATGCGCTACGTGACCAACGCGCGCAAGGAACTGGTCGCCATTTCGCGCAGCGGCGAGATTCTCATCGCCGACGACAGCGGCCGCGAACGCGAGCGTCACAAGGTGCCCTACGGCGCGACCCTGATGGTGACCGACGGTGCCAAGATCAAGGCCGGTGCGGTACTGGCCACCTGGGACCCGCATACCCGCCCGATCATCACCGAGTACGCTGGGCGTGTGCGTTTCGAAAACGTCGAGGAAGGCGTAACCGTCGCCAAGCAGGTGGACGACGTGACCGGTCTGTCGACGCTGGTTGTCATCGATCCCAAGCGCAAGGGCAGCAGCGCCAAGGGTGTGCGGCCGCAGGTCAAGCTGCTCGACGAGTCCGGCAGCGAAATCAAGATTGCCGGCACCGATACGCTGGTCAATATCACCTTCCAGATCGGTTCGATCATCACGGTCAAGGATGGTCAGGATGTCTCGGTCGGCGACGTGCTTGCGCGGATCCCGCAGGAATCGTCCAAGACCCGCGACATCACCGGTGGTCTGCCGCGCGTGGCCGAGCTGTTCGAGGCCCGCTCGCCCAAGGACGCCGGCGTGCTCGCCGAAGTGACCGGCACCGTCTCCTTCGGCAAGGACACCAAAGGCAAGCAGCGCCTGGTCATCACCGACATGGACGGCGTGCCGCACGAATATCTGATTACCAAGGAAAAACACGTCACCGCCCACGACGGCCAGATTGTCCAGAAGGGCGAGATGATCGTCGACGGCCCGGTCGATCCGCATGACATCCTGCGTCTGCAGGGGGTCGAGGCACTGGCACGCTACATCACCGACGAGGTGCAGGACGTCTATCGCCTTCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGGCAGATGCTGCGTCGCGTCACGGTTGCGGATCCGGGCGATACCGGCCTGATTCCGGGCGAGCAGATCGAGCGTTCCGAGGTGTTGCAGATCAACGACGAAATGCTCGCCAGCGAGAAGCAGCCGGCTACGTACGATCCGATCCTGCTCGGCATCACCAAGGCCTCGCTGTCGACGGATTCCTTCATTTCGGCGGCCTCCTTCCAGGAAACCACCCGTGTGCTCACCGAAGCCGCGATCATGGGCAAGAAGGACGAACTGCGCGGCCTGAAGGAAAACGTCATCGTCGGCCGCCTGATCCCAGCCGGCAGCGGCCTGGCCTACCACAACACGCGTCGCCGCCAGGCGGCCGGGGAAGACCTGGGTGCCGAACACCTGATCGAAGGCGGAGAGGACGCGAACCCGGCCGAAAACCAGGAGGTTGCTTGA
PROTEIN sequence
Length: 1400
MKALLDLFKQATHEEEFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEGFVVVEPGMTPLNKGQLLTEEDYLNKLEEYGDEFRALMGAEAIRELLRGIDLHTEVESLHAEIGKTGSDTKLKKLSKRLKILEGFQKSGIKPEWMILEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKKMALELFKPFIFNRLEVLGLATTIKAAKKMVEDEEPIVWDLLEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQTEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTREMVNAKGEGMVFADVAEARRAYDNRVADLHARVTVRIKEVTLDENKNRVETIKRVETTLGRSLLSEILPPGLPFSHVDKALKKKEISKLINASFRRCGLRETVIFADKLMYTGFTFATRAGMSIAIKDMLIPGEKDQILGAAEAEVKEIESQYTSGLVTQGERYNKVVDIWGRAGDAVAKAMMAQLGGEKVTDRAGKEVTQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNMLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTKNGLAVKALVEGGEVVEPLRERILGRVAASDIIHPESQETVYEAGTLLSEDVVDTIEALGIDEVKVRTPLTCETRYGLCAKCYGRDLGRGYLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQLEAKSNGTVQYTAAMRYVTNARKELVAISRSGEILIADDSGRERERHKVPYGATLMVTDGAKIKAGAVLATWDPHTRPIITEYAGRVRFENVEEGVTVAKQVDDVTGLSTLVVIDPKRKGSSAKGVRPQVKLLDESGSEIKIAGTDTLVNITFQIGSIITVKDGQDVSVGDVLARIPQESSKTRDITGGLPRVAELFEARSPKDAGVLAEVTGTVSFGKDTKGKQRLVITDMDGVPHEYLITKEKHVTAHDGQIVQKGEMIVDGPVDPHDILRLQGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVTVADPGDTGLIPGEQIERSEVLQINDEMLASEKQPATYDPILLGITKASLSTDSFISAASFQETTRVLTEAAIMGKKDELRGLKENVIVGRLIPAGSGLAYHNTRRRQAAGEDLGAEHLIEGGEDANPAENQEVA*