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scnpilot_p_inoc_scaffold_6369_3

Organism: SCNpilot_P_inoc_Thiobacillus_strain2_63_34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(2360..2755)

Top 3 Functional Annotations

Value Algorithm Source
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MBP5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 131.0
  • Bit_score: 228
  • Evalue 2.90e-57
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 250
  • Evalue 1.30e-63
conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 131.0
  • Bit_score: 225
  • Evalue 9.00e-57

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Taxonomy

RLO_Burkholderiales_64_99 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGACACACGCCCATGCTTTCCGTGTTTCCGTAAATCCGCCTTCCCACCTGGCCGAGCTGTCCGGCTTCGCGCGGTTGCGCAGTCTGGCCCGCCCTGCGGCGCAAGGGCTGCTGCTGGCCGCGCTGCTGCTGTTCCTGGCCGGAACCGCGCAGGCCGCCGGTTCCTCGATGCCGTGGGAAGGCCCGCTGCAATCCATCCTTGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATCATCATCATCGCCACCGGCCTCGCGCTCGCCTTCGGCGACACGTCGGGCGGATTCCGCAAGCTGATCCAGATCGTGTTCGGTCTGACTATCGCATTCGCGGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCCGTCGTATGA
PROTEIN sequence
Length: 132
MTHAHAFRVSVNPPSHLAELSGFARLRSLARPAAQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLTIAFAASSFFLSFFSFSGGAVV*