ggKbase home page

scnpilot_p_inoc_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 260 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_60_1
unknown

Not on your lists

1..66
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_60_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..1849)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F731_9PROT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDL01259.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_60_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2061..2387
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6Y0_9PROT
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDL01260.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_60_4
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2407..4122)
DNA (1716bp) protein (572aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Signal transduction histidine kinase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3ADY7_9PROT rbh
Signal transduction histidine kinase rbh
scnpilot_p_inoc_scaffold_60_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4160..5212)
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3P9_9PROT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77506.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
conserved membrane protein of unknown function
scnpilot_p_inoc_scaffold_60_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5217..5489)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F956_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL01376.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_60_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5570..6424)
DNA (855bp) protein (285aa)
Putative Alpha/beta hydrolase fold n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7P4_9PROT rbh
putative Alpha/beta hydrolase fold rbh
Putative Alpha/beta hydrolase fold {ECO:0000313|EMBL:CDL01377.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source=
scnpilot_p_inoc_scaffold_60_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6429..7280)
DNA (852bp) protein (284aa)
Dioxygenase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U3P6_9PROT rbh
conserved protein of unknown function(Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase superfamily) rbh
Uncharacterized protein {ECO:0000313|EMBL:CDL01378.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_60_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7574..8455)
DNA (882bp) protein (294aa)
Cyclohexadienyl dehydrogenase / prephenate dehydrogenase {ECO:0000313|EMBL:CAM77502.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CAM77502.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria;
tyrC; Protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH); Prephenate dehydrogenase (PDH) (EC:1.3.1.12 1.3.1.43) rbh
Cyclohexadienyl dehydrogenase / prephenate dehydrogenase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3P5_9PROT rbh
scnpilot_p_inoc_scaffold_60_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8457..9554)
DNA (1098bp) protein (366aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CDL01380.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CDL01380.1};; Imidazole acetol-phosp
Histidinol-phosphate aminotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F791_9PROT rbh
scnpilot_p_inoc_scaffold_60_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9599..10462)
DNA (864bp) protein (288aa)
putative P-protein [Includes: Chorismate mutase ; Prephenate dehydratase] (EC:4.2.1.51 5.4.99.5) rbh
Chorismate mutase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUS7_9PROT rbh
Chorismate mutase {ECO:0000313|EMBL:CAM74384.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum g
scnpilot_p_inoc_scaffold_60_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10597..11769
DNA (1173bp) protein (391aa)
metX; Homoserine O-acetyltransferase (Homoserine O-trans-acetylase) (Homoserine transacetylase) (HTA) (EC:2.3.1.31) rbh
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acety
Homoserine O-acetyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUS6_9PROT rbh
scnpilot_p_inoc_scaffold_60_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11766..12395
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8Z5_9PROT rbh
conserved protein of unknown function(methionine biosynthesis protein MetW)
Uncharacterized protein {ECO:0000313|EMBL:CDL01383.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_60_14
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12379..13743)
DNA (1365bp) protein (455aa)
Major facilitator superfamily MFS_1 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RKX7_ACCPU
major facilitator superfamily transporter
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_p_inoc_scaffold_60_15
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13852..14778
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EW0_POLSJ rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABE42932.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro
scnpilot_p_inoc_scaffold_60_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14779..15519)
DNA (741bp) protein (247aa)
Putative SAM-dependent methyltransferases n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F794_9PROT rbh
putative SAM-dependent methyltransferases
Putative SAM-dependent methyltransferases {ECO:0000313|EMBL:CDL01385.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
scnpilot_p_inoc_scaffold_60_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15523..16317)
DNA (795bp) protein (265aa)
ABC-type multidrug transport system, permease component n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUS2_9PROT rbh
putative ABC transporter, permease protein
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:CAM74379.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetos
scnpilot_p_inoc_scaffold_60_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16314..17063)
DNA (750bp) protein (250aa)
Putative ABC transporter, ATP-binding protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7Q4_9PROT rbh
putative ABC transporter, ATP-binding protein rbh
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDL01387.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum
scnpilot_p_inoc_scaffold_60_19
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17162..17533
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8Z6_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL01388.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_60_20
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17671..19080
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037B91DA
Uncharacterized protein {ECO:0000313|EMBL:KJS43599.1}; Flags: Fragment;; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospiri
putative uncharacterized protein
scnpilot_p_inoc_scaffold_60_21
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19077..20141)
DNA (1065bp) protein (355aa)
Putative CDP tyvulose epimerase n=1 Tax=Azospirillum brasilense RepID=Q6QW26_AZOBR rbh
Putative CDP tyvulose epimerase {ECO:0000313|EMBL:AAS83039.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirill
putative CDP tyvulose epimerase
scnpilot_p_inoc_scaffold_60_22
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20182..22077)
DNA (1896bp) protein (632aa)
Putative uncharacterized protein id=4158343 bin=GWF2_Planctomycete_41_51 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein Tax=GWF2_Planctomycetes_41_51_curated
hypothetical protein
scnpilot_p_inoc_scaffold_60_23
unknown

Not on your lists

22238..23080
DNA (843bp) protein (281aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_60_24
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23077..23856
DNA (780bp) protein (260aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L852_MAGSM
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABK44145.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="M
scnpilot_p_inoc_scaffold_60_25
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23861..25156)
DNA (1296bp) protein (432aa)
Glycosyl transferase, group 1 n=3 Tax=Crocosphaera watsonii RepID=T2ISU4_CROWT
Uncharacterized protein {ECO:0000313|EMBL:CCQ67350.1}; TaxID=1284629 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 0402.;"
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_60_26
unknown

Not on your lists

comp(25147..25683)
DNA (537bp) protein (179aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_60_27
unknown

Not on your lists

comp(25680..26249)
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_60_28
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26246..28168)
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI000347AEFC
Glycosyl transferase family 2 {ECO:0000313|EMBL:EKD09492.1}; TaxID=459495 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis C1.;"
glycosyl transferase family 2
scnpilot_p_inoc_scaffold_60_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28281..30590
DNA (2310bp) protein (770aa)
Putative TPR repeat protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7H0_9PROT rbh
putative TPR repeat protein
Putative TPR repeat protein {ECO:0000313|EMBL:CDL01414.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnet
scnpilot_p_inoc_scaffold_60_30
unknown

Not on your lists

30587..31654
DNA (1068bp) protein (356aa)

This feature has no annotations

Displaying items 1-30 of 260 in total

View Taxonomy