ggKbase home page

scnpilot_p_inoc_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 270 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_79_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
Cbb3-type cytochrome c oxidase subunit n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U3A4_9PROT
fixP; Cytochrome c oxidase, cbb3-type, FixP subunit
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sou
scnpilot_p_inoc_scaffold_79_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365..529)
DNA (165bp) protein (55aa)
Putative Cb-type cytochrome c oxidase CcoQ subunit n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F445_9PROT
putative Cb-type cytochrome c oxidase CcoQ subunit
Putative Cb-type cytochrome c oxidase CcoQ subunit {ECO:0000313|EMBL:CDL00167.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospir
scnpilot_p_inoc_scaffold_79_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(539..1270)
DNA (732bp) protein (244aa)
Cb-type cytochrome c oxidase CcoO subunit n=2 Tax=Magnetospirillum gryphiswaldense RepID=Q6N0B7_9PROT rbh
ccoO; Cytochrome C oxidase, mono-heme subunit/FixO rbh
Cytochrome C oxidase, mono-heme subunit/FixO {ECO:0000313|EMBL:CDL00168.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.
scnpilot_p_inoc_scaffold_79_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1286..2737)
DNA (1452bp) protein (484aa)
Cytochrome CBB3 subunit 1 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U3A1_9PROT rbh
fixN; Cytochrome c oxidase subunit 1 homolog, bacteroid rbh
Cytochrome c oxidase subunit 1 homolog, bacteroid {ECO:0000313|EMBL:CDL00169.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospiri
scnpilot_p_inoc_scaffold_79_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2975..4168
DNA (1194bp) protein (398aa)
SAM-dependent methyltransferases n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3A0_9PROT rbh
SAM-dependent methyltransferases {ECO:0000313|EMBL:CAM77357.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
putative AdoMet-dependent methyltransferase, UPF0064 family
scnpilot_p_inoc_scaffold_79_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4173..4568
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F452_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL00172.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_79_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4556..5668)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U398_9PROT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77355.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
hypothetical protein
scnpilot_p_inoc_scaffold_79_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5737..6774)
DNA (1038bp) protein (346aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae;
Signal transduction histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U397_9PROT rbh
putative Signal transduction histidine kinase rbh
scnpilot_p_inoc_scaffold_79_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6782..7159)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3R7_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL00175.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_79_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7167..7718)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U395_9PROT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77352.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
hypothetical protein rbh
scnpilot_p_inoc_scaffold_79_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7813..9108)
DNA (1296bp) protein (432aa)
Putative two-component sensor protein histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F456_9PROT rbh
Putative two-component sensor protein histidine kinase rbh
Putative two-component sensor protein histidine kinase {ECO:0000313|EMBL:CDL00177.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magneto
scnpilot_p_inoc_scaffold_79_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9115..9837)
DNA (723bp) protein (241aa)
Two-component transcriptional regulator, winged helix family n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U393_9PROT rbh
arcA; DNA-binding response regulator in two-component regulatory system with ArcB or CpxA rbh
DNA-binding response regulator in two-component regulatory system with ArcB or CpxA {ECO:0000313|EMBL:CDL00178.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillale
scnpilot_p_inoc_scaffold_79_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10008..10373)
DNA (366bp) protein (122aa)
Chain A, Crystal Structure Of Dnaa Domainiv Complexed With Dnaabox Dna n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U392_9PROT
putative Chromosomal replication initiator
Putative Chromosomal replication initiator {ECO:0000313|EMBL:CDL00179.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
scnpilot_p_inoc_scaffold_79_14
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10508..11443)
DNA (936bp) protein (312aa)
pip; Proline iminopeptidase (EC:3.4.11.5) rbh
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421, ECO:0000313|EMBL:CDL00180.1}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421, ECO:0000313|EMBL:CDL00180.1};; TaxID=1430440 species="Bacteria; Proteob
Proline iminopeptidase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3S1_9PROT rbh
scnpilot_p_inoc_scaffold_79_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11503..12537
DNA (1035bp) protein (345aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:2.4.2.29)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F777_9PROT rbh
scnpilot_p_inoc_scaffold_79_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12538..13665
DNA (1128bp) protein (376aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U389_9PROT rbh
scnpilot_p_inoc_scaffold_79_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13725..14129
DNA (405bp) protein (135aa)
Sec-independent protein translocase protein TatC n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U388_9PROT
conserved protein of unknown function, containing truncated bacterial-like Globin domain
Sec-independent protein translocase protein TatC {ECO:0000313|EMBL:CAM77345.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillu
scnpilot_p_inoc_scaffold_79_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14179..14772)
DNA (594bp) protein (198aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U387_9PROT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDL00184.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_79_19
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14830..15774)
DNA (945bp) protein (315aa)
Hsp33 protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U386_9PROT rbh
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum
hslO; heat shock protein HSP33
scnpilot_p_inoc_scaffold_79_20
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15759..16694)
DNA (936bp) protein (312aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
argF; ornithine carbamoyltransferase 2, chain F; CP4-6 prophage (EC:2.1.3.3) rbh
Ornithine carbamoyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U385_9PROT rbh
scnpilot_p_inoc_scaffold_79_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16691..17863)
DNA (1173bp) protein (391aa)
astC; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.11 2.6.1.81) rbh
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:CDL00187.1};; TaxID=1
Acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F465_9PROT rbh
scnpilot_p_inoc_scaffold_79_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18105..18458)
DNA (354bp) protein (118aa)
Methyl-accepting chemotaxis protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U383_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL00188.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_79_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18645..19076)
DNA (432bp) protein (144aa)
CBS domain protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U382_9PROT
Putative signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:CDL00189.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetos
scnpilot_p_inoc_scaffold_79_24
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19258..19779)
DNA (522bp) protein (174aa)
Putative Heat shock protein Hsp20 n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3T2_9PROT
putative Heat shock protein Hsp20
Putative Heat shock protein Hsp20 {ECO:0000313|EMBL:CDL00190.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="
scnpilot_p_inoc_scaffold_79_25
unknown

Not on your lists

comp(19952..20158)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_79_26
unknown

Not on your lists

comp(20155..20328)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_79_27
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20379..20618)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZSJ2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME70317.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
hypothetical protein
scnpilot_p_inoc_scaffold_79_28
unknown

Not on your lists

20792..21016
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_79_29
unknown

Not on your lists

comp(21022..21462)
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_79_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21662..22837
DNA (1176bp) protein (392aa)
ABC transporter substrate binding protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5N4_9PROT rbh
ABC transporter substrate binding protein {ECO:0000313|EMBL:CAM78191.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" so
conserved protein of unknown function, containing Extracellular ligand-binding receptor domain
Displaying items 1-30 of 270 in total

View Taxonomy