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scnpilot_p_inoc_scaffold_132

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Displaying items 1-30 of 222 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_132_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..119
-----------------
DNA (117bp)
protein (39aa)
Ammonium transport protein (Amt family) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7Q1_9PROT
amtB; ammonium transport protein (Amt family)
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospir
scnpilot_p_inoc_scaffold_132_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244..1404
-----------------
DNA (1161bp)
protein (387aa)
putative aminotransferase (aatC) (EC:2.6.1.-)
Putative aminotransferase (AatC) {ECO:0000313|EMBL:CDL00512.1}; EC=2.6.1.- {ECO:0000313|EMBL:CDL00512.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodo
Putative aminotransferase (AatC) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F561_9PROT rbh
scnpilot_p_inoc_scaffold_132_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1413..3836
-----------------
DNA (2424bp)
protein (808aa)
DNA translocase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F848_9PROT rbh
ftsK; DNA translocase rbh
DNA translocase {ECO:0000313|EMBL:CDL00511.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum g
scnpilot_p_inoc_scaffold_132_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3894..4538
-----------------
DNA (645bp)
protein (215aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW30_9PROT rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
putative outer-membrane lipoprotein carrier protein rbh
scnpilot_p_inoc_scaffold_132_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4876..5664
-----------------
DNA (789bp)
protein (263aa)
putative exodeoxyribonuclease III (xthA) (EC:3.1.11.2) rbh
Putative exodeoxyribonuclease III (XthA) {ECO:0000313|EMBL:CDL00509.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CDL00509.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillal
Endonuclease/exonuclease/phosphatase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TW29_9PROT rbh
scnpilot_p_inoc_scaffold_132_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5661..6008)
-----------------
DNA (348bp)
protein (116aa)
Membrane protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW28_9PROT
hypothetical protein
Membrane protein {ECO:0000313|EMBL:CAM74835.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gr
scnpilot_p_inoc_scaffold_132_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6076..7587)
-----------------
DNA (1512bp)
protein (504aa)
Mg chelatase-related protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW26_9PROT rbh
Mg chelatase-related protein {ECO:0000313|EMBL:CAM74833.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magneto
putative bifunctional enzyme and transcriptional regulator
scnpilot_p_inoc_scaffold_132_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7773..9290
-----------------
DNA (1518bp)
protein (506aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Putative transduction histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7P1_9PROT rbh
putative transduction histidine kinase rbh
scnpilot_p_inoc_scaffold_132_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9331..10296)
-----------------
DNA (966bp)
protein (322aa)
gshB; glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162, ECO:0000313|EMBL:CDL00502.1}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162, ECO:0000313|EMBL:CDL00502.1};; GSH synthetase {ECO:0000256|HAMAP-Rul
Glutathione synthetase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F551_9PROT rbh
scnpilot_p_inoc_scaffold_132_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10316..11608)
-----------------
DNA (1293bp)
protein (431aa)
Periplasmic or secreted lipoprotein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW20_9PROT rbh
conserved protein of Transport-associated and nodulation domain
Periplasmic or secreted lipoprotein {ECO:0000313|EMBL:CAM74827.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="
scnpilot_p_inoc_scaffold_132_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11664..12029)
-----------------
DNA (366bp)
protein (122aa)
UPF0102 protein MGR_0794 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW19_9PROT
UPF0102 protein MGR_0794 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magneto
hypothetical protein
scnpilot_p_inoc_scaffold_132_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12026..12913)
-----------------
DNA (888bp)
protein (296aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Tetrapyrrole methylase family protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TW18_9PROT rbh
rsmI; Ribosomal RNA small subunit methyltransferase I
scnpilot_p_inoc_scaffold_132_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12934..14256
-----------------
DNA (1323bp)
protein (441aa)
Putative ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F546_9PROT rbh
putative ABC-type branched-chain amino acid transport systems, periplasmic component rbh
Putative ABC-type branched-chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:CDL00497.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillal
scnpilot_p_inoc_scaffold_132_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14408..15724)
-----------------
DNA (1317bp)
protein (439aa)
Putative nitrate regulatory protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZCP2_AZOL4 rbh
putative nitrate regulatory protein
Putative nitrate regulatory protein {ECO:0000313|EMBL:CBS89523.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azo
scnpilot_p_inoc_scaffold_132_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15931..17037)
-----------------
DNA (1107bp)
protein (369aa)
Magnetosome membrane associated protein MmeA n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TVB2_9PROT rbh
mmeA; Magnetosome membrane associated protein MmeA rbh
Magnetosome membrane associated protein MmeA {ECO:0000313|EMBL:CDL00398.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.
scnpilot_p_inoc_scaffold_132_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17468..18187
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4F5_9PROT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDL00400.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_132_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18318..19052
-----------------
DNA (735bp)
protein (245aa)
Cytochrome c assembly protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U428_9PROT rbh
Cytochrome c assembly protein {ECO:0000313|EMBL:CAM77635.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnet
ccmC; heme exporter subunit ; membrane component of ABC superfamily rbh
scnpilot_p_inoc_scaffold_132_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19058..19291
-----------------
DNA (234bp)
protein (78aa)
Cytochrome c biogenesis protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F4V0_9PROT
ccmD; cytochrome c biogenesis protein
Putative uncharacterized protein {ECO:0000313|EMBL:CAM77636.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
scnpilot_p_inoc_scaffold_132_19
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19288..19740
-----------------
DNA (453bp)
protein (151aa)
Cytochrome c-type biogenesis protein CcmE n=3 Tax=Magnetospirillum gryphiswaldense RepID=A4GL48_9PROT
cycJ; periplasmic heme chaperone
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
scnpilot_p_inoc_scaffold_132_20
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19766..21751
-----------------
DNA (1986bp)
protein (662aa)
Cytochrome c biogenesis factor n=2 Tax=Magnetospirillum gryphiswaldense MSR-1 RepID=A4GL49_9PROT rbh
ccmF; heme lyase, CcmF subunit rbh
Cytochrome c biogenesis factor {ECO:0000313|EMBL:ABO28736.1}; TaxID=431944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magn
scnpilot_p_inoc_scaffold_132_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21755..22294
-----------------
DNA (540bp)
protein (180aa)
Thiol-disulfide isomerase n=2 Tax=Magnetospirillum gryphiswaldense MSR-1 RepID=A4GL50_9PROT rbh
ccmG; periplasmic thioredoxin of cytochrome c-type biogenesis rbh
Thiol-disulfide isomerase {ECO:0000313|EMBL:ABO28737.1}; TaxID=431944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetosp
scnpilot_p_inoc_scaffold_132_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22291..22758
-----------------
DNA (468bp)
protein (156aa)
Cytochrome C biogenesis protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U433_9PROT
cycL; Cytochrome c-type biogenesis protein cycL precursor
Cytochrome c-type biogenesis protein cycL {ECO:0000313|EMBL:CDL00406.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
scnpilot_p_inoc_scaffold_132_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22755..23582
-----------------
DNA (828bp)
protein (276aa)
TPR repeat n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U434_9PROT rbh
TPR repeat {ECO:0000313|EMBL:CAM77641.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphisw
cycH; Cytochrome c-type biogenesis protein CycH rbh
scnpilot_p_inoc_scaffold_132_24
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23612..24277)
-----------------
DNA (666bp)
protein (222aa)
Heme exporter protein B n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TVB4_9PROT rbh
ccmB; heme exporter subunit ; membrane component of ABC superfamily rbh
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetos
scnpilot_p_inoc_scaffold_132_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24274..24948)
-----------------
DNA (675bp)
protein (225aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Heme ABC transporter (Heme exporter protein A), ATP-binding protein (Cytochrome c-type biogenesis) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4E8_9PROT rbh
ccmA; heme ABC transporter (heme exporter protein A), ATP-binding protein (cytochrome c-type biogenesis) rbh
scnpilot_p_inoc_scaffold_132_26
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25177..27762
-----------------
DNA (2586bp)
protein (862aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687, ECO:0000313|EMBL:CDL00394.1};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687, ECO:0000313|EMBL:CDL00394.1
acnB; Aconitate hydratase 2 (EC:4.2.1.3 4.2.1.99) rbh
Aconitate hydratase 2 n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4L5_9PROT rbh
scnpilot_p_inoc_scaffold_132_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27891..28412)
-----------------
DNA (522bp)
protein (174aa)
Hemerythrin-like protein PA1673 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TV40_9PROT
putative bacteriohemerythrin
Putative bacteriohemerythrin {ECO:0000313|EMBL:CDL00484.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magne
scnpilot_p_inoc_scaffold_132_28
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28662..29153
-----------------
DNA (492bp)
protein (164aa)
Predicted membrane-bound metal-dependent hydrolase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TV39_9PROT
ydjM; Predicted membrane-bound metal-dependent hydrolase
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDL00485.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospir
scnpilot_p_inoc_scaffold_132_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29148..29726)
-----------------
DNA (579bp)
protein (193aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteoba
Oxidoreductase subunit of the alternative pyrimidine degradation pathway n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F833_9PROT rbh
rutE; oxidoreductase subunit of the alternative pyrimidine degradation pathway rbh
scnpilot_p_inoc_scaffold_132_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29807..30817
-----------------
DNA (1011bp)
protein (337aa)
Putative xylanase/chitin deacetylase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F536_9PROT rbh
putative xylanase/chitin deacetylase rbh
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:CDL00487.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sourc
Displaying items 1-30 of 222 in total

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