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scnpilot_p_inoc_scaffold_731

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_731_1
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..6509
-----------------
DNA (6507bp)
protein (2169aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Dickeya dadantii (strain 3937) RepID=E0SBQ1_DICD3
Putative calcium binding hemolysin protein {ECO:0000313|EMBL:KIL98497.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
hemagglutinin/hemolysin-like protein
scnpilot_p_inoc_scaffold_731_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6654..7541
-----------------
DNA (888bp)
protein (296aa)
putative Probable serine/threonine-protein kinase pknL (EC:2.7.11.1) rbh
Putative Probable serine/threonine-protein kinase pknL {ECO:0000313|EMBL:CDL00026.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CDL00026.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Putative Probable serine/threonine-protein kinase pknL n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6U1_9PROT rbh
scnpilot_p_inoc_scaffold_731_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7598..8377
-----------------
DNA (780bp)
protein (260aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U125_9PROT rbh
putative Glucose 1-dehydrogenase 2 rbh
Putative Glucose 1-dehydrogenase 2 {ECO:0000313|EMBL:CDL00025.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source=
scnpilot_p_inoc_scaffold_731_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8753..10648
-----------------
DNA (1896bp)
protein (632aa)
UvrABC system protein C n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U126_9PROT rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease UvrABC, endonuclease subunit
scnpilot_p_inoc_scaffold_731_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10623..11222
-----------------
DNA (600bp)
protein (200aa)
pgsA; phosphatidylglycerophosphate synthetase (EC:2.7.8.5) rbh
Phosphatidylglycerophosphate synthetase {ECO:0000313|EMBL:CDL00022.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CDL00022.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
Phosphatidylglycerophosphate synthetase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3P8_9PROT rbh
scnpilot_p_inoc_scaffold_731_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11219..11713
-----------------
DNA (495bp)
protein (165aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6T6_9PROT
mobB; molybdopterin-guanine dinucleotide biosynthesis protein B
Molybdopterin-guanine dinucleotide biosynthesis protein B {ECO:0000313|EMBL:CDL00021.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magn
scnpilot_p_inoc_scaffold_731_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11710..12969
-----------------
DNA (1260bp)
protein (420aa)
Molybdopterin biosynthesis MoeA protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U129_9PROT rbh
Molybdopterin biosynthesis MoeA protein {ECO:0000313|EMBL:CAM76586.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sour
moeA; molybdopterin biosynthesis protein rbh
scnpilot_p_inoc_scaffold_731_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12966..13217
-----------------
DNA (252bp)
protein (84aa)
moaD; molybdopterin synthase, small subunit (EC:1.5.3.4)
ThiamineS n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U130_9PROT
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum
scnpilot_p_inoc_scaffold_731_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13222..13692
-----------------
DNA (471bp)
protein (157aa)
Molybdopterin-converting factor large subunit n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U131_9PROT
moaE; Molybdenum cofactor biosynthesis protein E
Molybdopterin-converting factor large subunit {ECO:0000313|EMBL:CAM76588.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;
scnpilot_p_inoc_scaffold_731_10
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13780..14136
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3X4_MAGSA
Orf21 putative lipoprotein {ECO:0000313|EMBL:KIL98684.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetos
hypothetical protein
scnpilot_p_inoc_scaffold_731_11
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14154..14657
-----------------
DNA (504bp)
protein (168aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VZ98_METEP
DNA-directed RNA polymerase specialized sigma subunit sigma24-like protein {ECO:0000313|EMBL:KIL98685.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodosp
sigma-70 family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_731_12
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14654..15421
-----------------
DNA (768bp)
protein (256aa)
Predicted transmembrane transcriptional regulator n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3X6_MAGSA
transmembrane transcriptional regulator
Predicted transmembrane transcriptional regulator {ECO:0000313|EMBL:BAE51449.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospiril
scnpilot_p_inoc_scaffold_731_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15480..16460
-----------------
DNA (981bp)
protein (327aa)
Beta-lactamase domain protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANU7_AZOBR rbh
beta-lactamase domain protein rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:CCD00920.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiri
scnpilot_p_inoc_scaffold_731_14
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16539..18287
-----------------
DNA (1749bp)
protein (583aa)
UPI0003CE715E related cluster n=1 Tax=unknown RepID=UPI0003CE715E rbh
RpoH suppressor {ECO:0000313|EMBL:ESW93134.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269
suhR; patatin rbh
scnpilot_p_inoc_scaffold_731_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18256..18861)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6G3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL01039.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_731_16
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18967..19503)
-----------------
DNA (537bp)
protein (179aa)
Subunit of chromate transporter n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y9A6_9PROT
Subunit of chromate transporter {ECO:0000313|EMBL:EME69601.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Ma
chromate transporter
scnpilot_p_inoc_scaffold_731_17
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19506..20042)
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035C93C9
Chromate transport protein (Chra-like) {ECO:0000313|EMBL:EME69602.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sou
chromate transporter family protein
scnpilot_p_inoc_scaffold_731_18
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20039..21292)
-----------------
DNA (1254bp)
protein (418aa)
LysR family transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AA37_9PROT rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EME69603.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sour
LysR family transcriptional regulator rbh
scnpilot_p_inoc_scaffold_731_19
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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21538..22566
-----------------
DNA (1029bp)
protein (343aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000315DEA6 rbh
TRAP dicarboxylate transporter subunit DctP Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
TRAP dicarboxylate transporter subunit DctP
scnpilot_p_inoc_scaffold_731_20
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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22664..23185
-----------------
DNA (522bp)
protein (174aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YI73_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO29425.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogen
scnpilot_p_inoc_scaffold_731_21
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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23182..24498
-----------------
DNA (1317bp)
protein (439aa)
Neu5Ac permease n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4Y1M8_9PROT rbh
TRAP-type C4 dicarboxylate transport system large permease
TRAP-type C4 dicarboxylate transport system large permease {ECO:0000313|EMBL:BAO29426.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfurital
scnpilot_p_inoc_scaffold_731_22
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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24664..25752
-----------------
DNA (1089bp)
protein (363aa)
PrpF protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IV23_PSEUL rbh
PrpF protein
PrpF protein {ECO:0000313|EMBL:BAK77525.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (
scnpilot_p_inoc_scaffold_731_23
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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25823..26869
-----------------
DNA (1047bp)
protein (349aa)
4-Oxalomesaconate hydratase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAS0_MAGSA rbh
4-oxalomesaconate hydratase
4-oxalomesaconate hydratase {ECO:0000313|EMBL:BAO29037.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydr
scnpilot_p_inoc_scaffold_731_24
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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26872..27561
-----------------
DNA (690bp)
protein (230aa)
4-Hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAR9_MAGSA rbh
hypothetical protein
4-Hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:BAE49056.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;"
scnpilot_p_inoc_scaffold_731_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27572..28489
-----------------
DNA (918bp)
protein (306aa)
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1S4_RHOP2
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABD05586.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" so
scnpilot_p_inoc_scaffold_731_26
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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28517..30757
-----------------
DNA (2241bp)
protein (747aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3N1_9PROT
putative methyl-accepting chemotaxis protein
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDK99083.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.
scnpilot_p_inoc_scaffold_731_27
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(30806..32017)
-----------------
DNA (1212bp)
protein (404aa)
putative ferredoxin--NAD(+) reductase (EC:1.18.1.-)
Putative ferredoxin--NAD(+) reductase {ECO:0000313|EMBL:CCQ74511.1}; EC=1.18.1.- {ECO:0000313|EMBL:CCQ74511.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A392_STAND rbh
scnpilot_p_inoc_scaffold_731_28
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(32020..32343)
-----------------
DNA (324bp)
protein (108aa)
2Fe-2S ferredoxin (FdII) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXX5_AZOBR
fdxB; 2Fe-2S ferredoxin
2Fe-2S ferredoxin {ECO:0000313|EMBL:CCQ74510.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-
scnpilot_p_inoc_scaffold_731_29
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(32449..33612)
-----------------
DNA (1164bp)
protein (388aa)
putative cytochrome P450 (EC:1.14.-.-) rbh
Putative cytochrome P450 {ECO:0000313|EMBL:CCQ74509.1}; EC=1.14.-.- {ECO:0000313|EMBL:CCQ74509.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
Putative cytochrome P450 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXX6_AZOBR rbh
scnpilot_p_inoc_scaffold_731_30
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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33760..34662
-----------------
DNA (903bp)
protein (301aa)
Putative transcriptional regulator, AraC/XylS family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXX8_AZOBR
putative Transcriptional regulator, AraC family
Putative Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCQ74508.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;
Displaying items 1-30 of 43 in total

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