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scnpilot_p_inoc_scaffold_948

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_948_1
unknown

Not on your lists

comp(83..244)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_948_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(460..2232)
DNA (1773bp) protein (591aa)
Putative ssDNA exonuclease, 5'--> 3'-specific {ECO:0000313|EMBL:CDL01249.1}; EC=3.1.-.- {ECO:0000313|EMBL:CDL01249.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiri
putative ssDNA exonuclease, 5'--> 3'-specific (EC:3.1.-.-) rbh
Putative ssDNA exonuclease, 5'--> 3'-specific n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F712_9PROT rbh
scnpilot_p_inoc_scaffold_948_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2239..3222)
DNA (984bp) protein (328aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11) rbh
Fructose 1,6-bisphosphatase II n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6V6_9PROT rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magn
scnpilot_p_inoc_scaffold_948_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3248..4540)
DNA (1293bp) protein (431aa)
hom; homoserine dehydrogenase (HDH) (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CDL01251.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria
Homoserine dehydrogenase (HDH) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8Z9_9PROT rbh
scnpilot_p_inoc_scaffold_948_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4540..5769)
DNA (1230bp) protein (410aa)
dapL; LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:CDL01252.1}; EC=2.6.1.83 {ECO:0000313|EMBL:CDL01252.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; R
LL-diaminopimelate aminotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7A6_9PROT rbh
scnpilot_p_inoc_scaffold_948_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5892..7451)
DNA (1560bp) protein (520aa)
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVY3_9PROT rbh
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer {ECO:0000313|EMBL:CAM74790.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
mcp; Methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_948_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7602..8564)
DNA (963bp) protein (321aa)
Methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8U5_9PROT
mcp; Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDL01253.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source
scnpilot_p_inoc_scaffold_948_8
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8561..9178)
DNA (618bp) protein (206aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3AYZ4_PSEAC
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAD62829.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour
methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_948_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9321..9626)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F719_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL01254.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_948_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9623..10714)
DNA (1092bp) protein (364aa)
Putative translation initiation factor IF-2 n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F6W2_9PROT rbh
putative translation initiation factor IF-2 rbh
Putative translation initiation factor IF-2 {ECO:0000313|EMBL:CDL01255.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;
scnpilot_p_inoc_scaffold_948_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10932..12725
DNA (1794bp) protein (598aa)
phbC; Poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-) rbh
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:CDL01256.1}; EC=2.3.1.- {ECO:0000313|EMBL:CDL01256.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; R
Poly-beta-hydroxybutyrate polymerase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F901_9PROT rbh
scnpilot_p_inoc_scaffold_948_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12849..13280
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U228_9PROT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:CAM76935.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
scnpilot_p_inoc_scaffold_948_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13272..14567)
DNA (1296bp) protein (432aa)
putative Ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-) rbh
Putative Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:CDL01227.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDL01227.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U229_9PROT rbh
scnpilot_p_inoc_scaffold_948_14
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14655..15116)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GMP0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJS42700.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
hypothetical protein
scnpilot_p_inoc_scaffold_948_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15230..16570)
DNA (1341bp) protein (447aa)
putative Ferric reductase (EC:1.18.1.3)
Ferric reductase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWL6_9PROT
Ferric reductase {ECO:0000313|EMBL:CAM75023.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gr
scnpilot_p_inoc_scaffold_948_16
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16780..17928
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037E01CC rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS33991.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium
phosphonate metabolism protein PhnM
scnpilot_p_inoc_scaffold_948_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17979..19439)
DNA (1461bp) protein (487aa)
guaB; Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) (EC:1.1.1.205) rbh
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U231_9PROT rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:00
scnpilot_p_inoc_scaffold_948_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19601..19942
DNA (342bp) protein (114aa)
Protein required for attachment to host cells n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U232_9PROT
Protein required for attachment to host cells {ECO:0000313|EMBL:CAM76939.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;
hypothetical protein
scnpilot_p_inoc_scaffold_948_19
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20056..21027
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003799580
Uncharacterized protein {ECO:0000313|EMBL:EKS35142.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
helix-turn-helix, AraC type
scnpilot_p_inoc_scaffold_948_20
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21258..22754
DNA (1497bp) protein (499aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=2 Tax=Rhodospirillum rubrum RepID=Q2RTN3_RHORT rbh
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor rbh
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ABC22512.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillace
scnpilot_p_inoc_scaffold_948_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22793..23530)
DNA (738bp) protein (246aa)
ftsJ; Ribosomal RNA large subunit (23S) methyltransferase (EC:2.1.1.-) rbh
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U233_9PROT rbh
scnpilot_p_inoc_scaffold_948_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23534..24535)
DNA (1002bp) protein (334aa)
putative exopolyphosphatase (EC:3.6.1.11) rbh
Putative exopolyphosphatase {ECO:0000313|EMBL:CDL01232.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CDL01232.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospir
Putative exopolyphosphatase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F784_9PROT rbh
scnpilot_p_inoc_scaffold_948_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24939..25205)
DNA (267bp) protein (89aa)
Uncharacterized protein n=18 Tax=Enterobacteriaceae RepID=L2YJW9_ECOLX
Putative prophage protein {ECO:0000313|EMBL:AKA90562.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
hypothetical protein
scnpilot_p_inoc_scaffold_948_24
Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25205..25387)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:CEP37097.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5
scnpilot_p_inoc_scaffold_948_25
unknown

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comp(25463..25771)
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_948_26
unknown

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comp(25791..26114)
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_948_27
unknown

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comp(26143..26349)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_948_28
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26346..26576)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G6G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY11474.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
scnpilot_p_inoc_scaffold_948_29
unknown

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26735..27238
DNA (504bp) protein (168aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_948_30
unknown

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comp(27356..28120)
DNA (765bp) protein (255aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

View Taxonomy