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scnpilot_p_inoc_scaffold_1184

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1184_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(177..1691)
DNA (1515bp) protein (505aa)
Predicted Fe-S oxidoreductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W264_MAGSA
Fe-S oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Fe-S oxidoreductase
scnpilot_p_inoc_scaffold_1184_2
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(1744..3654)
DNA (1911bp) protein (637aa)
Putative uncharacterized protein id=4158343 bin=GWF2_Planctomycete_41_51 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein Tax=GWF2_Planctomycetes_41_51_curated
radical SAM domain-containing protein
scnpilot_p_inoc_scaffold_1184_3
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3891..5249
DNA (1359bp) protein (453aa)
Radical SAM superfamily protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H8L7_9DELT rbh
Radical SAM superfamily protein {ECO:0000313|EMBL:EGY25628.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="De
radical SAM protein rbh
scnpilot_p_inoc_scaffold_1184_4
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5246..8896
DNA (3651bp) protein (1217aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFH13114.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFH13114.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirilla
Glycosyltransferase, group 2 family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHV5_9PROT
glycosyltransferase
scnpilot_p_inoc_scaffold_1184_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8893..10488
DNA (1596bp) protein (532aa)
Glycosyl transferase-like protein n=1 Tax=Azospirillum brasilense RepID=Q6QW88_AZOBR
Glycosyl transferase-like protein {ECO:0000313|EMBL:AAS83014.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiri
glycosyl transferase-like protein
scnpilot_p_inoc_scaffold_1184_6
unknown

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comp(10490..11137)
DNA (648bp) protein (216aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1184_7
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

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comp(11130..11774)
DNA (645bp) protein (215aa)
Radical SAM domain protein n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WM62_DESPC
Radical SAM domain protein {ECO:0000313|EMBL:KKU13899.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
Radical SAM domain protein
scnpilot_p_inoc_scaffold_1184_8
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

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comp(11755..12645)
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
Spore coat polysaccharide biosynthesis protein spsK n=1 Tax=uncultured bacterium RepID=K1XTQ8_9BACT
spsK; Spore coat polysaccharide biosynthesis protein spsK Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
scnpilot_p_inoc_scaffold_1184_9
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12649..13620)
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase (EC:3.13.1.1) Tax=RBG_13_Deltaproteobacteria_58_19_curated
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U0S0_9EURY
NAD-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_1184_10
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

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comp(13620..14207)
DNA (588bp) protein (196aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RIFOXYD1_FULL_OD1_48_21_curated
dTDP-4-dehydrorhamnose 3,5-epimerase id=1956034 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
dTDP-4-dehydrorhamnose 3,5-epimerase
scnpilot_p_inoc_scaffold_1184_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14780..16120
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NR22_AZOS1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI70851.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp
scnpilot_p_inoc_scaffold_1184_12
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16137..17411
DNA (1275bp) protein (425aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79) rbh
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Sphingomonas wittichii RepID=UPI0002E7BAF6 rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KKC27639.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" s
scnpilot_p_inoc_scaffold_1184_13
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17415..19580)
DNA (2166bp) protein (722aa)
Cyclic nucleotide-binding domain-containing protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQL3_PUSST rbh
cyclic nucleotide-binding domain-containing protein
Tax=BJP_IG2069_Clostridiales_42_11
scnpilot_p_inoc_scaffold_1184_14
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(19587..20678)
DNA (1092bp) protein (364aa)
ABC transporter ATP-binding subunit, DevA type n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5TWF3_9PLAN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83734.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
scnpilot_p_inoc_scaffold_1184_15
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20675..21853)
DNA (1179bp) protein (393aa)
ABC transporter n=1 Tax=cyanobacterium PCC 7702 RepID=UPI0003747D81
ABC transporter {ECO:0000313|EMBL:KIJ82607.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
ABC transporter permease protein
scnpilot_p_inoc_scaffold_1184_16
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(21853..22902)
DNA (1050bp) protein (350aa)
Secretion protein HlyD n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MD82_ANAVT
hypothetical protein
Gll1428 protein {ECO:0000313|EMBL:BAC89369.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
scnpilot_p_inoc_scaffold_1184_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23001..23840)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYY4_9PROT rbh
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDK97438.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_1184_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23864..24772
DNA (909bp) protein (303aa)
Putative DNA-binding transcriptional regulator, LysR family n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWH4_9PROT rbh
putative DNA-binding transcriptional regulator, LysR family rbh
Putative DNA-binding transcriptional regulator, LysR family {ECO:0000313|EMBL:CDK97437.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Ma
scnpilot_p_inoc_scaffold_1184_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24926..25360
DNA (435bp) protein (145aa)
Putative transcriptional regulator, MerR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZI72_AZOL4
MerR family transcriptional regulator
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:CBS91186.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;"
scnpilot_p_inoc_scaffold_1184_20
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25357..25473
DNA (117bp) protein (39aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6T3_9PROT
etfB; Electron transfer flavoprotein subunit beta
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:CDL01159.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;
Displaying 20 items

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