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scnpilot_p_inoc_scaffold_528_2

Organism: SCNpilot_P_inoc_Magnetospirillum_64_120

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(230..1108)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXP0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 288.0
  • Bit_score: 517
  • Evalue 9.00e-144
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 288.0
  • Bit_score: 517
  • Evalue 1.30e-143
rpoH; sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 288.0
  • Bit_score: 515
  • Evalue 1.30e-143
  • rbh

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCGAGCCCGTGTGCCCGCCATCGCCGCCGACGATACCGGCTTGATCAAGTATATGCGCGAAATCCGCGACTTTCCGGTGCTGGAACCGGAACAGGAATACATGCTTGCCAAGCGCTGGGTCGATTACGAGGACACCGACGCCGCCCACCAGCTCGTCACCAGCCATTTGCGTCTGGTGGCCAAGATCGCCATGGGATACCGCCATTACGGCCTGCCCATGGCCGACCTGATTTCCGAAGGCAATCTGGGCCTGATGCGGGCGGTGAAGAAGTTCGAGCCCGAACGCGGCTTCCGTCTGGCCACCTATGCCATGTGGTGGATCAAGGCGTCCTTGAACGAATTCGTGCTGAACTCCTGGTCGCTGGTCAAGATCGGCACCCTGGCGGCACAGAAAAAGCTGTTCTTCAACCTGCGCAAGGTGAAGACCAAGCTGCGTCTGATGGATCAGGTCGAACTGGCGCCCGCCGACGTGACTGCCATCGCCACCGAATTGGGCGTTTCCGAAAACGACGTGGTCAACATGAACCGCCGCATGGGCGGGCGCGATTCGTCGCTGAACACCCCGGTGGGCGAAAGCGGCACCGAAATCATCGAATTGCTGCCTGACGAGGTGGATGACCAGGAAACCGGTCTGGCCAAGCGCGAAGAATTGTCCAAGGGTCGCAAGCTGATCGCCGGCGCCCTGGACCACCTGAACGACCGCGAACGGGAAATCTTCGTCGAGCGCCGTCTGCGCGACAACCCGCTGACCCTGGAGGAACTGGGCGAGCGTTTCGGCGTCAGCCGTGAACGCATCCGCCAGATCGAGGTCAAGGCCTTCGAAAAGGTCCGCGCCGTCGTCACCGCCGGCTTCCTGCCGGCGCCACAGGCGGTTTGA
PROTEIN sequence
Length: 293
MRARVPAIAADDTGLIKYMREIRDFPVLEPEQEYMLAKRWVDYEDTDAAHQLVTSHLRLVAKIAMGYRHYGLPMADLISEGNLGLMRAVKKFEPERGFRLATYAMWWIKASLNEFVLNSWSLVKIGTLAAQKKLFFNLRKVKTKLRLMDQVELAPADVTAIATELGVSENDVVNMNRRMGGRDSSLNTPVGESGTEIIELLPDEVDDQETGLAKREELSKGRKLIAGALDHLNDREREIFVERRLRDNPLTLEELGERFGVSRERIRQIEVKAFEKVRAVVTAGFLPAPQAV*