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scnpilot_p_inoc_scaffold_528

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_528_1
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..133
DNA (132bp) protein (44aa)
GIY-YIG nuclease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036221EA
excinuclease ABC subunit C Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
excinuclease ABC subunit C
scnpilot_p_inoc_scaffold_528_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230..1108)
DNA (879bp) protein (293aa)
RNA polymerase sigma factor RpoH n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXP0_9PROT rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria
rpoH; sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins rbh
scnpilot_p_inoc_scaffold_528_3
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1272..2237
DNA (966bp) protein (322aa)
Glycerate dehydrogenase (EC:1.1.1.29) rbh
Glycerate dehydrogenase {ECO:0000313|EMBL:CDK98169.1}; EC=1.1.1.29 {ECO:0000313|EMBL:CDK98169.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
Glycerate dehydrogenase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EY96_9PROT rbh
scnpilot_p_inoc_scaffold_528_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2369..3019
DNA (651bp) protein (217aa)
Regulatory protein, TetR n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TXP2_9PROT rbh
Putative transcriptional regulatory protein, TetR family rbh
Putative transcriptional regulatory protein, TetR family {ECO:0000313|EMBL:CDK98168.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magne
scnpilot_p_inoc_scaffold_528_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3114..6368)
DNA (3255bp) protein (1085aa)
putative Histidine kinase (EC:2.7.13.3) rbh
Putative Histidine kinase {ECO:0000313|EMBL:CDK98151.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDK98151.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospiril
Putative Histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1H2_9PROT rbh
scnpilot_p_inoc_scaffold_528_6
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6399..7238)
DNA (840bp) protein (280aa)
Putative ABC-type phosphate/phosphonate transport system periplasmic component n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EY13_9PROT rbh
putative ABC-type phosphate/phosphonate transport system periplasmic component rbh
Putative ABC-type phosphate/phosphonate transport system periplasmic component {ECO:0000313|EMBL:CDK98150.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rh
scnpilot_p_inoc_scaffold_528_7
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7413..8387)
DNA (975bp) protein (325aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=55518 species="Bacteria; Proteobac
bioB; biotin synthetase (Biotin synthase) (EC:2.8.1.6)
Biotin synthase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXR1_9PROT rbh
scnpilot_p_inoc_scaffold_528_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8509..9687
DNA (1179bp) protein (393aa)
putative 8-amino-7-oxononanoate synthase (EC:2.3.1.47) rbh
Putative 8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:CDK98146.1}; EC=2.3.1.47 {ECO:0000313|EMBL:CDK98146.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillal
Putative 8-amino-7-oxononanoate synthase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1G7_9PROT rbh
scnpilot_p_inoc_scaffold_528_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9684..10316
DNA (633bp) protein (211aa)
Putative Carboxylesterase BioH n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EY09_9PROT rbh
putative Carboxylesterase BioH rbh
Putative Carboxylesterase BioH {ECO:0000313|EMBL:CDK98145.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
scnpilot_p_inoc_scaffold_528_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10313..11038
DNA (726bp) protein (242aa)
Putative methltransferase, enzyme of biotin synthesis n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EY72_9PROT
putative methltransferase, enzyme of biotin synthesis
Putative methltransferase, enzyme of biotin synthesis {ECO:0000313|EMBL:CDK98144.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetos
scnpilot_p_inoc_scaffold_528_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11042..11656
DNA (615bp) protein (205aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
bioD; Dethiobiotin synthetase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWH2_9PROT rbh
scnpilot_p_inoc_scaffold_528_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11653..13014
DNA (1362bp) protein (454aa)
bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62) rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:CAM74980.1}; EC=2.6.1.62 {ECO:0000313|EMBL:CAM74980.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYB2_9PROT rbh
scnpilot_p_inoc_scaffold_528_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12957..13505
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1G1_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK98141.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
scnpilot_p_inoc_scaffold_528_14
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13647..14048
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Serratia sp. ATCC 39006 RepID=V3SZ20_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KFX18010.1}; TaxID=555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium
hypothetical protein
scnpilot_p_inoc_scaffold_528_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14134..15144
DNA (1011bp) protein (337aa)
Putative Secretion protein HlyD n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EY05_9PROT rbh
putative Secretion protein HlyD
Putative Secretion protein HlyD {ECO:0000313|EMBL:CDK98140.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Ma
scnpilot_p_inoc_scaffold_528_16
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15147..16397
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWH5_9PROT rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CAM74982.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
conserved membrane protein of unknown function rbh
scnpilot_p_inoc_scaffold_528_17
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16394..17077
DNA (684bp) protein (228aa)
Lipoprotein releasing system ATP-binding protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWH6_9PROT rbh
Lipoprotein releasing system ATP-binding protein {ECO:0000313|EMBL:CAM74983.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillu
lolD; lipoprotein-releasing system (ABC transporter), ATP-binding protein lolD rbh
scnpilot_p_inoc_scaffold_528_18
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17186..17734
DNA (549bp) protein (183aa)
Transcriptional regulator, TetR family n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWH7_9PROT
putative Transcriptional regulator, TetR family
Putative Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDK98137.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirill
scnpilot_p_inoc_scaffold_528_19
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17754..18857
DNA (1104bp) protein (368aa)
Membrane-fusion protein n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TWH8_9PROT rbh
putative RND efflux membrane fusion protein precursor
Membrane-fusion protein {ECO:0000313|EMBL:CAM74985.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospiri
scnpilot_p_inoc_scaffold_528_20
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18868..21942
DNA (3075bp) protein (1025aa)
Putative multidrug efflux transporter (RND family) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EXZ9_9PROT rbh
Putative multidrug efflux transporter (RND family) {ECO:0000313|EMBL:CDK98135.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospir
Putative multidrug efflux transporter (RND family) rbh
scnpilot_p_inoc_scaffold_528_21
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21979..23520)
DNA (1542bp) protein (514aa)
Cytochrome cd1 nitrite reductase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0H6_9PROT rbh
Cytochrome cd1 nitrite reductase {ECO:0000313|EMBL:CAM76383.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Mag
hypothetical protein rbh
scnpilot_p_inoc_scaffold_528_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23517..24644)
DNA (1128bp) protein (376aa)
Putative Coenzyme PQQ synthesis protein E (Putative nirJ) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZM5_9PROT rbh
putative Coenzyme PQQ synthesis protein E (putative nirJ) rbh
Putative Coenzyme PQQ synthesis protein E (Putative nirJ) {ECO:0000313|EMBL:CDK98607.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magn
scnpilot_p_inoc_scaffold_528_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24610..25134)
DNA (525bp) protein (175aa)
Transcriptional regulators n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0H8_9PROT
nirH; Protein nirH
Transcriptional regulators {ECO:0000313|EMBL:CAM76385.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetosp
scnpilot_p_inoc_scaffold_528_24
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25131..25574)
DNA (444bp) protein (148aa)
Regulatory proteins, AsnC/Lrp n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0H9_9PROT
Regulatory proteins, AsnC/Lrp {ECO:0000313|EMBL:CAM76386.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnet
nirG; Protein nirG
scnpilot_p_inoc_scaffold_528_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25579..26073)
DNA (495bp) protein (165aa)
Transcriptional regulators n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0I0_9PROT
Transcriptional regulators {ECO:0000313|EMBL:CAM76387.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetosp
nirL; Protein nirL
scnpilot_p_inoc_scaffold_528_26
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26064..26513)
DNA (450bp) protein (150aa)
Regulatory proteins, AsnC/Lrp n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0I1_9PROT
Regulatory proteins, AsnC/Lrp {ECO:0000313|EMBL:CAM76388.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnet
nirD; Protein nirD
scnpilot_p_inoc_scaffold_528_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26516..27679)
DNA (1164bp) protein (388aa)
Protein nirF n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZM8_9PROT rbh
nirF; Protein nirF
Protein nirF {ECO:0000313|EMBL:CDK98612.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryp
scnpilot_p_inoc_scaffold_528_28
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27676..28011)
DNA (336bp) protein (112aa)
Cytochrome c55X n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2A0_9PROT
nirC; Cytochrome c55X
Cytochrome c55X {ECO:0000313|EMBL:CDK98613.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum g
scnpilot_p_inoc_scaffold_528_29
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28008..28769)
DNA (762bp) protein (254aa)
Putative Tetrapyrrole methylase(putative nirE) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZH9_9PROT rbh
putative Tetrapyrrole methylase(putative nirE) rbh
Putative Tetrapyrrole methylase(putative nirE) {ECO:0000313|EMBL:CDK98614.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Mag
scnpilot_p_inoc_scaffold_528_30
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28838..29872)
DNA (1035bp) protein (345aa)
Cytochrome c-552 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TUE9_9PROT rbh
Cytochrome c-552 {ECO:0000313|EMBL:CAM74256.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gr
nirB; Cytochrome c-552 rbh
Displaying items 1-30 of 70 in total

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