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scnpilot_p_inoc_scaffold_69

Search features with annotation key words

Displaying items 121-150 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_69_121
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129460..130275
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z097_PARAH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGT10896.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminoph
scnpilot_p_inoc_scaffold_69_122
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130347..131981
DNA (1635bp) protein (545aa)
chaperonin GroEL (EC:3.6.4.10) rbh
60 kDa chaperonin n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y596_PARAH rbh
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus
scnpilot_p_inoc_scaffold_69_123
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132001..132756
DNA (756bp) protein (252aa)
Dehydrogenase with variable specificity (EC:1.1.1.100) rbh
UPI0003D1B1A6 related cluster n=1 Tax=unknown RepID=UPI0003D1B1A6 rbh
Contig22, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51952.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
scnpilot_p_inoc_scaffold_69_124
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132843..134861)
DNA (2019bp) protein (673aa)
Fis family GAF modulated sigma54 specific transcriptional regulator n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YHF4_PARAH rbh
Fis family GAF modulated sigma54 specific transcriptional regulator rbh
Fis family GAF modulated sigma54 specific transcriptional regulator {ECO:0000313|EMBL:AGT10893.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
scnpilot_p_inoc_scaffold_69_125
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134983..135480)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y022_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT10892.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminoph
scnpilot_p_inoc_scaffold_69_126
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135687..136622)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z092_PARAH rbh
transcriptional regulator, LysR family rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGT10891.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Par
scnpilot_p_inoc_scaffold_69_127
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136789..139005
DNA (2217bp) protein (739aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
catalase/peroxidase (EC:1.11.1.7) rbh
Catalase-peroxidase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y589_PARAH rbh
scnpilot_p_inoc_scaffold_69_128
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139058..139570)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D8P8_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH84762.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium oppo
scnpilot_p_inoc_scaffold_69_129
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139563..142400)
DNA (2838bp) protein (946aa)
UPI0003D0682A related cluster n=1 Tax=unknown RepID=UPI0003D0682A rbh
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ESZ25828.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
sarcosine oxidase subunit alpha family protein
scnpilot_p_inoc_scaffold_69_130
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142397..142666)
DNA (270bp) protein (90aa)
Sarcosine oxidase delta subunit n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CA6_RHILO
Sarcosine oxidase, delta subunit family {ECO:0000313|EMBL:CDX35961.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
sarcosine oxidase subunit delta
scnpilot_p_inoc_scaffold_69_131
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142677..143930)
DNA (1254bp) protein (418aa)
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:EYR81549.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR81549.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae
Sarcosine oxidase subunit beta n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJW5_9RHIZ
sarcosine oxidase subunit beta
scnpilot_p_inoc_scaffold_69_132
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143983..146394)
DNA (2412bp) protein (804aa)
dimethylglycine dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00037EAE96 rbh
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:AID34068.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
FAD dependent oxidoreductase
scnpilot_p_inoc_scaffold_69_133
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146476..147171)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F8473
Transcriptional regulator {ECO:0000313|EMBL:ENN83885.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
transcriptional regulator
scnpilot_p_inoc_scaffold_69_134
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

147441..148442
DNA (1002bp) protein (334aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4EBFF rbh
Probable DctP (Periplasmic C4-dicarboxylate binding protein) {ECO:0000313|EMBL:EAP75591.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseo
family 7 extracellular solute-binding protein
scnpilot_p_inoc_scaffold_69_135
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148442..148936
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SM91_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP75590.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
tripartite AtP-independent periplasmic transporter subunit DctQ
scnpilot_p_inoc_scaffold_69_136
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148939..150222
DNA (1284bp) protein (428aa)
Probable DctM (C4-dicarboxylate permease, large subunit) n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SM90_9RHOB rbh
Probable DctM (C4-dicarboxylate permease, large subunit) {ECO:0000313|EMBL:EAP75589.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovari
TRAP dicarboxylate transporter subunit DctM
scnpilot_p_inoc_scaffold_69_137
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150482..151378)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U3R1_RHOSH rbh
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABN78934.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rho
scnpilot_p_inoc_scaffold_69_138
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151505..152080
DNA (576bp) protein (192aa)
NADP oxidoreductase, coenzyme F420-dependent n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K8E0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO50755.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
NADP oxidoreductase coenzyme F420-dependent protein
scnpilot_p_inoc_scaffold_69_139
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152093..152509
DNA (417bp) protein (139aa)
Membrane protein n=1 Tax=Rhodobacter capsulatus B6 RepID=V8HBF8_RHOCA
DoxX family protein {ECO:0000313|EMBL:KCV82113.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlan
DoxX family protein
scnpilot_p_inoc_scaffold_69_140
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152569..153399
DNA (831bp) protein (277aa)
extradiol ring-cleavage dioxygenase subunit B (EC:1.13.-.-) rbh
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K4A9_9RHOB rbh
Putative cytoplasmic protein {ECO:0000313|EMBL:KHQ54090.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus
scnpilot_p_inoc_scaffold_69_141
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153411..154379
DNA (969bp) protein (323aa)
Glutathione S-transferase, omega n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QZW6_9RHOB rbh
Putative Glutathione S-transferase {ECO:0000313|EMBL:KHQ54091.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Pontic
glutathione S-transferase
scnpilot_p_inoc_scaffold_69_142
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154452..155192)
DNA (741bp) protein (247aa)
oxidoreductase n=1 Tax=Curvibacter lanceolatus RepID=UPI0003706EFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIJ48429.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_p_inoc_scaffold_69_143
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155219..155719)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4III3_RHIML
hypothetical protein
Permease, MFS {ECO:0000313|EMBL:CDH82062.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sino
scnpilot_p_inoc_scaffold_69_144
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155664..156059)
DNA (396bp) protein (132aa)
cupin n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030AB72F
Cupin {ECO:0000313|EMBL:KGJ03855.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus vers
cupin
scnpilot_p_inoc_scaffold_69_145
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156170..157057
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FW66_RHIML rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK78702.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinor
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_69_146
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157161..157358)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HH46_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ44292.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
livF; leucine/isoleucine/valine transporter ATP-binding subunit
scnpilot_p_inoc_scaffold_69_147
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157454..157795
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GCZ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ44285.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_69_148
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157800..158261)
DNA (462bp) protein (154aa)
Homoprotocatechuate degradation operon regulator, HpaR n=1 Tax=Citreicella sp. SE45 RepID=D0DCW5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO51421.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_69_149
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158360..158749
DNA (390bp) protein (130aa)
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FD3_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KEO51420.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
5-carboxymethyl-2-hydroxymuconate isomerase
scnpilot_p_inoc_scaffold_69_150
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158759..160270
DNA (1512bp) protein (504aa)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:KGM47228.1}; EC=1.2.1.8 {ECO:0000313|EMBL:KGM47228.1};; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAF2_9RHOB rbh
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase rbh
Displaying items 121-150 of 251 in total

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