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scnpilot_p_inoc_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_69_1
unknown

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_69_2
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99..878)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EL26_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:ESW61723.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
hypothetical protein
scnpilot_p_inoc_scaffold_69_3
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(875..1312)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EL44_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW61743.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
scnpilot_p_inoc_scaffold_69_4
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1314..2114)
DNA (801bp) protein (267aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ENA6_9RHOB rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW61724.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
family 3 extracellular solute-binding protein
scnpilot_p_inoc_scaffold_69_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2298..2933
DNA (636bp) protein (212aa)
GntR family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EP36_9RHOB rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:ESW61725.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rho
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_69_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2950..3951)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family id=2578681 bin=GWF1_Rhodobacteraceae_65_7 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
LacI family transcriptional regulator; K05499 LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG Tax=GWF1_Rhodobacteraceae_65_7_curated
LacI family transcriptional regulator
scnpilot_p_inoc_scaffold_69_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4092..5150
DNA (1059bp) protein (353aa)
Xylose isomerase domain-containing protein id=2578674 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
endonuclease Tax=GWF1_Rhodobacteraceae_65_7_curated
xylose isomerase domain-containing protein
scnpilot_p_inoc_scaffold_69_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5155..6279
DNA (1125bp) protein (375aa)
Oxidoreductase domain protein id=2578668 bin=GWF1_Rhodobacteraceae_65_7 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
oxidoreductase domain-containing protein Tax=GWF1_Rhodobacteraceae_65_7_curated
oxidoreductase domain-containing protein rbh
scnpilot_p_inoc_scaffold_69_9
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6276..7772
DNA (1497bp) protein (499aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] Tax=GWF1_Rhodobacteraceae_65_7_curated
ABC transporter related protein id=2578663 bin=GWF1_Rhodobacteraceae_65_7 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
ABC transporter rbh
scnpilot_p_inoc_scaffold_69_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7765..8736
DNA (972bp) protein (324aa)
Inner-membrane translocator id=2578659 bin=GWF1_Rhodobacteraceae_65_7 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
inner-membrane translocator; K10440 ribose transport system permease protein Tax=GWF1_Rhodobacteraceae_65_7_curated
inner-membrane translocator
scnpilot_p_inoc_scaffold_69_11
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8779..9738
DNA (960bp) protein (320aa)
ABC ribose transporter, periplasmic solute-binding protein id=2578654 bin=GWF1_Rhodobacteraceae_65_7 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
sugar ABC transporter periplasmic protein
scnpilot_p_inoc_scaffold_69_12
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9852..10313
DNA (462bp) protein (154aa)
Isoquinoline 1-oxidoreductase subunit alpha {ECO:0000313|EMBL:EEW60491.1}; EC=1.3.99.16 {ECO:0000313|EMBL:EEW60491.1};; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacter
iorA; isoquinoline 1-oxidoreductase subunit alpha (EC:1.3.99.16)
isoquinoline 1-oxidoreductase subunit alpha n=1 Tax=Ponticaulis koreensis RepID=UPI0003B61707
scnpilot_p_inoc_scaffold_69_13
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10317..12557
DNA (2241bp) protein (747aa)
Twin-arginine translocation pathway signal n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28JM7_JANSC rbh
Isoquinoline 1-oxidoreductase subunit beta {ECO:0000313|EMBL:KEJ89852.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" sour
twin-arginine translocation pathway signal
scnpilot_p_inoc_scaffold_69_14
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12554..13249)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00036C25AD
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EKV26642.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" sourc
transcriptional regulator
scnpilot_p_inoc_scaffold_69_15
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13335..15605
DNA (2271bp) protein (757aa)
Cytochrome P450 n=2 Tax=Labrenzia RepID=U7FZQ5_9RHOB rbh
Cytochrome P450 {ECO:0000313|EMBL:ERP90747.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
cytochrome P450
scnpilot_p_inoc_scaffold_69_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15602..16348)
DNA (747bp) protein (249aa)
Putative Pyrroline-5-carboxylate reductase {ECO:0000313|EMBL:CDX56479.1}; EC=1.5.1.2 {ECO:0000313|EMBL:CDX56479.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Ph
Pyrroline-5-carboxylate reductase id=2864441 bin=GWF1_Rhodobacteraceae_65_7 species=Pseudomonas sp. genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
pyrroline-5-carboxylate reductase
scnpilot_p_inoc_scaffold_69_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16457..18172
DNA (1716bp) protein (572aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003620994 rbh
Putative Methylmalonyl-CoA mutase domain-containing protein {ECO:0000313|EMBL:CDX13292.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhiz
hypothetical protein
scnpilot_p_inoc_scaffold_69_18
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18167..19069)
DNA (903bp) protein (301aa)
ptb; phosphate butyryltransferase; K00634 phosphate butyryltransferase [EC:2.3.1.19] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
ptb; phosphate butyryltransferase (EC:2.3.1.19)
Phosphate butyryltransferase, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16BX8_ROSDO
scnpilot_p_inoc_scaffold_69_19
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19063..20163)
DNA (1101bp) protein (367aa)
buk; butyrate kinase; K00929 butyrate kinase [EC:2.7.2.7] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
buk; butyrate kinase (EC:2.7.2.7)
Probable butyrate kinase n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16BX9_ROSDO rbh
scnpilot_p_inoc_scaffold_69_20
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20167..21606)
DNA (1440bp) protein (480aa)
cpnE; 5-oxovalerate dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Putative aldehyde dehydrogenase ycbD n=1 Tax=Halomonas boliviensis LC1 RepID=G9E852_9GAMM rbh
cpnE; 5-oxovalerate dehydrogenase
scnpilot_p_inoc_scaffold_69_21
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21681..22976)
DNA (1296bp) protein (432aa)
4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
4-aminobutyrate aminotransferase apoenzyme n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28MS5_JANSC rbh
4-aminobutyrate aminotransferase
scnpilot_p_inoc_scaffold_69_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23038..23700
DNA (663bp) protein (221aa)
Transcriptional regulator, XRE family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAD5_PARDP
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_69_23
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23734..24909)
DNA (1176bp) protein (392aa)
Branched-chain amino acid ABC transporter, periplasmic binding protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q162M3_ROSDO rbh
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched-chain amino acid ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_69_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24934..25986)
DNA (1053bp) protein (351aa)
Branched-chain amino acid ABC transporter, permease protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q162M4_ROSDO rbh
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched-chain amino acid ABC transporter permease
scnpilot_p_inoc_scaffold_69_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25990..26898)
DNA (909bp) protein (303aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EB56_9RHOB rbh
branched-chain amino acid ABC transporter permease Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched-chain amino acid ABC transporter permease
scnpilot_p_inoc_scaffold_69_26
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26895..27614)
DNA (720bp) protein (240aa)
Branched chain amino acid ABC transporter, ATP-binding protein, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EB52_9RHOB rbh
branched chain amino acid ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched chain amino acid ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_69_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27614..28342)
DNA (729bp) protein (243aa)
Branched-chain amino acid ABC transporter, ATP-binding protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q162M7_ROSDO rbh
branched-chain amino acid ABC transporter ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
branched-chain amino acid ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_69_28
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28344..30464)
DNA (2121bp) protein (707aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
5-oxoprolinase (EC:3.5.2.9) rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAC8_PARDP rbh
scnpilot_p_inoc_scaffold_69_29
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30554..32302)
DNA (1749bp) protein (583aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
5-oxoprolinase (EC:3.5.2.9) rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAC9_PARDP rbh
scnpilot_p_inoc_scaffold_69_30
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32610..33563
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A0W4_9BACT rbh
helix-turn-helix domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
helix-turn-helix domain-containing protein
Displaying items 1-30 of 251 in total

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