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scnpilot_p_inoc_scaffold_69_6

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(2950..3951)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family id=2578681 bin=GWF1_Rhodobacteraceae_65_7 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 329.0
  • Bit_score: 545
  • Evalue 3.50e-152
  • rbh
LacI family transcriptional regulator; K05499 LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 329.0
  • Bit_score: 545
  • Evalue 5.00e-152
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 330.0
  • Bit_score: 448
  • Evalue 1.30e-123

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAAGCACGACCGCCCCAAGATCAGCGACGTTGCCCGCCTTGCCGGGGTTTCCACCGCCACGGTCAGCCGGGCGTTGTCGACCCCCGAGCGGGTCAGCGAGGACACCCGCGCCGCCGTGCAACAGGCGGTGGAGGCGACGGGATACCGGCTGAACCTCGCCGCGCGCAATCTGCGCCACCGGCGAACGGGCGGCATCGTGGCGCTGGTGCCGAACCTCGCCAACCCGTTCTTTTCGCAGATCCTGTCCGGCATCGCCTCGGTCCTTGGCCCGGCCGGTTACAACCTGCTGATTGCCGATACCCGCACCGCTGACGCGCAAACCCTGCTGGATTACGCCGAACCCAGCCGGGCCGACGGGCTGATCATTCTTGACGGCACGCTGCCCGCCGCCGCGCTGCAAGGGCGCGTGCCGGTGGTCGAGGCCTGCGAATGGGTGCCCGGCCTGCCCGCGCCGCGCGTGAAGATCGACAATCGCGCTGCGGCGGGACTGGCCGTAGATCATCTGGCCGATCTGGGCCATTGCCGCATCGGCCATGTCGCCGGGCCACGCGGCAACGTGCTGACCGAGGCGCGGCTGTCCGGCACGGTCGAGGCTCTGGCGGCGCGCGGCCTGCCCTTCCCCGAGGACTATCTTTATCCTGGCGATTTCTCGCTGGATTCCGGGCGCGCGGCAGCGCGCATCTGGCTGGATCAACCCGCCGCCACCCGCCCGACCGCAGTATTCTTCGCCTCCGACGCCATGGCCTGCGGTTTCATCGGCGAGGTGCAGCGCCACGGGCTGCGCGTGCCGGGCGACCTGTCGGTGGTGGGCTTTGACGATATCGAACTGGTCGCCCATATCTCGCCACCACTGACCACGATCCGCCAGCCCCGGACCGAGATCGGCCGCGCCGCAGCCGAACGCATGCTGGCCTGCCTGAAGGGCGAGGCCCGCGATGCCGATACCGTGCTGCCGGTCGAACTGATCCTGCGCGCCAGCACGGGCCCCGCCCCGGCCTGA
PROTEIN sequence
Length: 334
MKHDRPKISDVARLAGVSTATVSRALSTPERVSEDTRAAVQQAVEATGYRLNLAARNLRHRRTGGIVALVPNLANPFFSQILSGIASVLGPAGYNLLIADTRTADAQTLLDYAEPSRADGLIILDGTLPAAALQGRVPVVEACEWVPGLPAPRVKIDNRAAAGLAVDHLADLGHCRIGHVAGPRGNVLTEARLSGTVEALAARGLPFPEDYLYPGDFSLDSGRAAARIWLDQPAATRPTAVFFASDAMACGFIGEVQRHGLRVPGDLSVVGFDDIELVAHISPPLTTIRQPRTEIGRAAAERMLACLKGEARDADTVLPVELILRASTGPAPA*