name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_189_1
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(156..590)
|
Transcriptional regulator, MarR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B7X1_PARDP
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABL71615.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Para
|
|
scnpilot_p_inoc_scaffold_189_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
999..2297
|
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B6EAE0
rbh
urtB; urea ABC transporter urea binding protein UrtB; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
urtB; urea ABC transporter urea binding protein UrtB
rbh
|
|
scnpilot_p_inoc_scaffold_189_3
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2350..4287
|
Branched-chain amino acid ABC transporter permease n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJF5_9RHOB
rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ESW61143.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;
branched-chain amino acid ABC transporter permease
|
|
scnpilot_p_inoc_scaffold_189_4
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4390..5613
|
Branched-chain amino acid ABC transporter permease n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ELW9_9RHOB
rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ESW61142.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;
urtC; urea transport permease UrtC
|
|
scnpilot_p_inoc_scaffold_189_5
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5610..6374
|
urtD; urea ABC transporter ATP-binding protein UrtD (EC:3.6.3.-)
ABC transporter related id=2458322 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
|
|
scnpilot_p_inoc_scaffold_189_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6377..7072
|
ABC transporter related id=2458321 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
ABC transporter
|
|
scnpilot_p_inoc_scaffold_189_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7073..7810)
|
Putative uncharacterized protein id=2937918 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
branched-chain amino acid aminotransferase Tax=GWF1_Rhodobacteraceae_65_7_curated
branched-chain amino acid aminotransferase
|
|
scnpilot_p_inoc_scaffold_189_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7807..8706)
|
class IV aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWF1_Rhodobacteraceae_65_7_curated
Aminotransferase class IV id=2938021 bin=GWF1_Rhodobacteraceae_65_7 species=Ketogulonicigenium vulgare genus=Ketogulonicigenium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
class IV aminotransferase
rbh
|
|
scnpilot_p_inoc_scaffold_189_9
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8838..9479
|
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA2; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIG5_9RHOB
rbh
|
|
scnpilot_p_inoc_scaffold_189_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9483..9791)
|
Antifreeze protein, type I n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HR95_9RHOB
antifreeze protein, type I Tax=GWF1_Rhodobacteraceae_65_7_curated
antifreeze protein, type I
|
|
scnpilot_p_inoc_scaffold_189_11
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9892..11844)
|
Oxidoreductase, FMN-binding protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MC85_PSEPS
rbh
Oxidoreductase, FMN-binding protein {ECO:0000313|EMBL:ELS25151.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas ole
putative oxidoreductase
|
|
scnpilot_p_inoc_scaffold_189_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11974..13068)
|
Flagellar P-ring protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX46_9RHOB
rbh
flgI; flagellar basal body P-ring biosynthesis protein FlgA; K02394 flagellar P-ring protein precursor FlgI Tax=GWF1_Rhodobacteraceae_65_7_curated
flgI; flagellar basal body P-ring protein
|
|
scnpilot_p_inoc_scaffold_189_13
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13065..14069)
|
Flagellar hook-associated protein FlgL family protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX45_9RHOB
Flagellar hook-associated protein FlgL family protein {ECO:0000313|EMBL:EEW26570.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_189_14
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14070..15497)
|
Flagellar hook-associated protein FlgK n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX44_9RHOB
rbh
flgK; flagellar hook-associated protein FlgK; K02396 flagellar hook-associated protein 1 FlgK Tax=CG_Rhodob_01
flgK; flagellar hook-associated protein FlgK
|
|
scnpilot_p_inoc_scaffold_189_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15504..16805)
|
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX43_9RHOB
rbh
Uncharacterized protein {ECO:0000313|EMBL:EEW26568.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
flagellar hook protein FlgE
|
|
scnpilot_p_inoc_scaffold_189_16
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16900..17712)
|
OmpA/MotB domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX42_9RHOB
rbh
flagellar motor protein-like protein; K02557 chemotaxis protein MotB Tax=CG_Rhodob_01
putative chemotaxis MotB protein
|
|
scnpilot_p_inoc_scaffold_189_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17801..18976)
|
pcaF; beta-ketoadipyl CoA thiolase (EC:2.3.1.-); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003601E79
rbh
beta-ketoadipyl CoA thiolase
|
|
scnpilot_p_inoc_scaffold_189_18
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18973..20085)
|
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABL73146.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABL73146.1};; Flags: Precursor;; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCA2_PARDP
rbh
|
|
scnpilot_p_inoc_scaffold_189_19
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20219..22504
|
salicylyl-CoA 5-hydroxylase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F1E9
rbh
Salicylyl-CoA 5-hydroxylase {ECO:0000313|EMBL:KGJ09069.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versu
salicylyl-CoA 5-hydroxylase
|
|
scnpilot_p_inoc_scaffold_189_20
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22515..23252
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCA4_PARDP
rbh
short-chain dehydrogenase/reductase SDR
rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL73148.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Par
|
|
scnpilot_p_inoc_scaffold_189_21
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23249..23710
|
Transcriptional regulator, MarR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCA5_PARDP
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABL73149.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Para
|
|
scnpilot_p_inoc_scaffold_189_22
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23707..24525
|
enoyl-CoA hydratase (EC:4.2.1.17)
rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:ABL73150.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABL73150.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; P
Enoyl-CoA hydratase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCA6_PARDP
rbh
|
|
scnpilot_p_inoc_scaffold_189_23
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24582..25718
|
Acyl-CoA dehydrogenase domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCA7_PARDP
rbh
acyl-CoA dehydrogenase
rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABL73151.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Parac
|
|
scnpilot_p_inoc_scaffold_189_24
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25733..26185
|
Cupin domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSA8_9RHIZ
Cupin {ECO:0000313|EMBL:KGJ09074.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus vers
cupin
|
|
scnpilot_p_inoc_scaffold_189_25
uncultured bacterium, Bacteria
|
Not on your lists |
26185..26595
|
Thioesterase superfamily protein n=1 Tax=uncultured bacterium RepID=K2AT78_9BACT
Thioesterase superfamily protein {ECO:0000313|EMBL:EKD59583.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thioesterase superfamily protein
|
|
scnpilot_p_inoc_scaffold_189_26
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26592..26993
|
endoribonuclease L-PSP n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F1EF
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABL73153.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrifi
|
|
scnpilot_p_inoc_scaffold_189_27
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27052..28686
|
AMP-dependent synthetase and ligase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BCB0_PARDP
rbh
AMP-dependent synthetase/ligase
rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABL73154.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoc
|
|
scnpilot_p_inoc_scaffold_189_28
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28702..29157)
|
Putative uncharacterized protein id=2468877 bin=GWF1_Rhodobacteraceae_65_7 species=Loktanella vestfoldensis genus=Loktanella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
DoxX family protein {ECO:0000313|EMBL:KIX17908.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
doxX family protein
|
|
scnpilot_p_inoc_scaffold_189_29
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29154..29927)
|
Putative uncharacterized protein id=2468876 bin=GWF1_Rhodobacteraceae_65_7 species=Loktanella vestfoldensis genus=Loktanella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_189_30
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29911..30768)
|
UPF0276 protein SKA53_06462 id=2468875 bin=GWF1_Rhodobacteraceae_65_7 species=Loktanella vestfoldensis genus=Loktanella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
rbh
hypothetical protein; K09930 hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
|