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scnpilot_p_inoc_scaffold_274

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Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_274_1
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..1710)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U023_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ02654.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
hypothetical protein
scnpilot_p_inoc_scaffold_274_2
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1710..2840)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U022_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ02653.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
hypothetical protein rbh
scnpilot_p_inoc_scaffold_274_3
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3292..3609
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U020_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ02651.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_274_4
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3610..4179
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U019_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ02650.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
hypothetical protein
scnpilot_p_inoc_scaffold_274_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4301..4879
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3VWJ8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:GAJ96077.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_274_6
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4920..5663)
DNA (744bp) protein (248aa)
TatD family hydrolase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YU50_9RHIZ
TatD family hydrolase {ECO:0000313|EMBL:ERI14216.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.
TatD-related deoxyribonuclease
scnpilot_p_inoc_scaffold_274_7
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5666..7033)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F944_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX63831.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_274_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7030..7671)
DNA (642bp) protein (214aa)
Uncharacterized protein (Fragment) n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FB83_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX63832.1}; Flags: Fragment;; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_274_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7884..9821)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDL6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX64731.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
KAP P-loop domain-containing protein
scnpilot_p_inoc_scaffold_274_10
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9933..10781
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NSL0_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEE36493.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacte
hypothetical protein
scnpilot_p_inoc_scaffold_274_11
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10771..11685
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Z6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP78615.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp
hypothetical protein
scnpilot_p_inoc_scaffold_274_12
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11682..12947
DNA (1266bp) protein (422aa)
UPI0003D6A39B related cluster n=1 Tax=unknown RepID=UPI0003D6A39B rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHD02958.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methyloh
scnpilot_p_inoc_scaffold_274_13
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13004..13600)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W3P8_9RHOB rbh
Putative transcriptional regulator {ECO:0000313|EMBL:KGM85897.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseov
putative transcriptional regulator
scnpilot_p_inoc_scaffold_274_14
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13603..14487)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W3P7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ24836.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 21
hypothetical protein rbh
scnpilot_p_inoc_scaffold_274_15
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14601..15710
DNA (1110bp) protein (370aa)
Yld n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VIZ9_9RHOB rbh
Integrase {ECO:0000313|EMBL:KEP67964.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianensis.;"
integrase family protein rbh
scnpilot_p_inoc_scaffold_274_16
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15723..17003)
DNA (1281bp) protein (427aa)
Putative plasmid replication protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JPV9_9RHOB rbh
Putative plasmid replication protein {ECO:0000313|EMBL:EKE67275.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Cel
replication protein C
scnpilot_p_inoc_scaffold_274_17
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17164..18159)
DNA (996bp) protein (332aa)
Plasmid partitioning protein RepB n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4K8_9RHOB rbh
Plasmid partitioning protein RepB {ECO:0000313|EMBL:EEW56559.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacte
repB; putative plasmid partitioning protein RepB rbh
scnpilot_p_inoc_scaffold_274_18
unknown

Not on your lists

comp(18159..18266)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_274_19
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18263..19474)
DNA (1212bp) protein (404aa)
Putative replication protein A n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IXB2_9RHOB rbh
Putative replication protein A {ECO:0000313|EMBL:EKE67277.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribac
putative replication protein A rbh
scnpilot_p_inoc_scaffold_274_20
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19966..20304)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=A3T2W7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ11832.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
scnpilot_p_inoc_scaffold_274_21
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20900..21049
DNA (150bp) protein (50aa)
Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4L3_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGM46896.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22I
scnpilot_p_inoc_scaffold_274_22
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21068..21235
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D4L3_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHQ50011.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. U
scnpilot_p_inoc_scaffold_274_23
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21356..22267)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2P8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEJ94013.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter p
hypothetical protein
scnpilot_p_inoc_scaffold_274_24
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22731..23612)
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=A3U3J1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB82116.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
hypothetical protein
scnpilot_p_inoc_scaffold_274_25
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23609..24004)
DNA (396bp) protein (132aa)
Probably methylase/helicase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VJ09_9RHOB
Methylase {ECO:0000313|EMBL:KGB82115.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
methylase/helicase
scnpilot_p_inoc_scaffold_274_26
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24017..24472
DNA (456bp) protein (152aa)
Transposase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0X7_9RHIZ
Transposase {ECO:0000313|EMBL:EIM29869.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative IS3 family transposase, IS407 group, OrfB
scnpilot_p_inoc_scaffold_274_27
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24552..24818
DNA (267bp) protein (89aa)
Transposase IS3 n=2 Tax=Ochrobactrum RepID=U4V4Q7_9RHIZ
Transposase IS3 {ECO:0000313|EMBL:ERI12801.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
Insertion element ISR1 uncharacterized 10 kDa protein A3
scnpilot_p_inoc_scaffold_274_28
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24893..25651
DNA (759bp) protein (253aa)
Insertion sequence IS2A uncharacterized 48.2 kDa protein (Fragment) n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M709_9RHIZ rbh
Insertion sequence IS2A uncharacterized 48.2 kDa protein {ECO:0000313|EMBL:EKF16820.1}; Flags: Fragment;; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
integrase
scnpilot_p_inoc_scaffold_274_29
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26143..27354
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W6M7_9RHOB rbh
Acyl-CoA transferase {ECO:0000313|EMBL:KGM47321.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S
acyl-CoA transferase
scnpilot_p_inoc_scaffold_274_30
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27351..28517
DNA (1167bp) protein (389aa)
acd11; acyl-CoA dehydrogenase (EC:1.3.99.3)
Putative acyl-CoA dehydrogenase n=1 Tax=Roseovarius sp. 217 RepID=A3W6M6_9RHOB rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGM47320.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II
Displaying items 1-30 of 121 in total

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