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scnpilot_p_inoc_scaffold_314

Search features with annotation key words

Displaying items 61-90 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_314_61
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57637..58740
DNA (1104bp) protein (368aa)
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
GTP cyclohydrolase II (EC:3.5.4.25)
GTP cyclohydrolase II n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXB7_9RHOB rbh
scnpilot_p_inoc_scaffold_314_62
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58744..59397)
DNA (654bp) protein (218aa)
Alanine racemase domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXB4_9RHOB rbh
Alanine racemase domain protein {ECO:0000313|EMBL:EEW26639.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacte
porin
scnpilot_p_inoc_scaffold_314_63
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59525..60421)
DNA (897bp) protein (299aa)
Porin n=1 Tax=Rhodobacter blasticus RepID=PORI_RHOBL
Uncharacterized protein {ECO:0000313|EMBL:KEO60132.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
porin
scnpilot_p_inoc_scaffold_314_64
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60701..61252
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXB2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW26637.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_314_65
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


61399..63957
DNA (2559bp) protein (853aa)
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) rbh
Leucyl-tRNA synthetase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EP20_9RHOB rbh
scnpilot_p_inoc_scaffold_314_66
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63944..64429
DNA (486bp) protein (162aa)
Secreted periplasmic protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXB0_9RHOB
Secreted periplasmic protein {ECO:0000313|EMBL:EEW26635.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_314_67
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64426..65427
DNA (1002bp) protein (334aa)
polB; DNA polymerase II (EC:2.7.7.7)
DNA polymerase III delta n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXA9_9RHOB rbh
DNA polymerase III delta {ECO:0000313|EMBL:EEW26634.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. S
scnpilot_p_inoc_scaffold_314_68
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65465..66700)
DNA (1236bp) protein (412aa)
lys1; saccharopine dehydrogenase (EC:1.5.1.7) Tax=GWF1_Rhodobacteraceae_65_7_curated
lys1; saccharopine dehydrogenase (EC:1.5.1.7) rbh
Saccharopine dehydrogenase (NAD+, L-lysine-forming) id=2635337 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_314_69
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66741..67835)
DNA (1095bp) protein (365aa)
nspC; putative carboxynorspermidine decarboxylase protein (EC:4.1.1.-); K13747 carboxynorspermidine decarboxylase [EC:4.1.1.-] Tax=GWF1_Rhodobacteraceae_65_7_curated
nspC; carboxynorspermidine decarboxylase protein (EC:4.1.1.-) rbh
Carboxynorspermidine/carboxyspermidine decarboxylase id=2635335 bin=GWF1_Rhodobacteraceae_65_7 species=Ketogulonicigenium vulgare genus=Ketogulonicigenium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_314_70
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67935..68750)
DNA (816bp) protein (272aa)
PAP2 (Acid phosphatase) superfamily protein id=2448429 bin=GWF1_Rhodobacteraceae_65_7 species=Agrobacterium sp. ATCC 31749 genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
PAP2 (Acid phosphatase) superfamily protein Tax=GWF1_Rhodobacteraceae_65_7_curated
PAP2 (Acid phosphatase) superfamily protein
scnpilot_p_inoc_scaffold_314_71
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68743..70188)
DNA (1446bp) protein (482aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase id=2448433 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
scnpilot_p_inoc_scaffold_314_72
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70151..70474)
DNA (324bp) protein (108aa)
Lipid A biosynthesis protein id=2448520 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Lipid A biosynthesis protein Tax=GWF1_Rhodobacteraceae_65_7_curated
Lipid A biosynthesis protein
scnpilot_p_inoc_scaffold_314_73
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70471..71256)
DNA (786bp) protein (262aa)
dpm1; dolichol-phosphate mannosyltransferase (EC:2.4.1.83) Tax=GWF1_Rhodobacteraceae_65_7_curated
dpm1; dolichol-phosphate mannosyltransferase (EC:2.4.1.83)
Glycosyl transferase id=2448523 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_314_74
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71384..72562)
DNA (1179bp) protein (393aa)
ackA3; acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1] Tax=GWF1_Rhodobacteraceae_65_7_curated
ackA3; acetate kinase (EC:2.7.2.1)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003609DAE rbh
scnpilot_p_inoc_scaffold_314_75
unknown

Not on your lists

comp(72574..73167)
DNA (594bp) protein (198aa)
lipoprotein, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745C1E
scnpilot_p_inoc_scaffold_314_76
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73304..74326)
DNA (1023bp) protein (341aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B66823 rbh
periplasmic iron-binding protein
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_p_inoc_scaffold_314_77
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74296..75696)
DNA (1401bp) protein (467aa)
sensor signal transduction histidine kinase (EC:2.7.13.3) rbh
ATPase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B748B0 rbh
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_p_inoc_scaffold_314_78
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75693..76373)
DNA (681bp) protein (227aa)
chemotaxis protein CheY n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B350A4 rbh
two component transcriptional regulator
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_314_79
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76476..77441
DNA (966bp) protein (322aa)
Tricarboxylate transport protein TctC n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9S5Y9_9RHOB rbh
tctC2; tripartite tricarboxylate transporter (TTT) protein TctC
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_314_80
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77441..77881
DNA (441bp) protein (147aa)
tricarboxylic transport membrane protein n=1 Tax=Leucothrix mucor RepID=UPI0003B7483F
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_p_inoc_scaffold_314_81
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77892..79412
DNA (1521bp) protein (507aa)
Tricarboxylate transport membrane protein TctA n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QPQ2_9RHOB rbh
tctA2; tripartite tricarboxylate transporter (TTT) protein TctA
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_314_82
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79416..80774
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8M5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83962.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_314_83
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80767..81069
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPG8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83963.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_314_84
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81137..82168
DNA (1032bp) protein (344aa)
Aldo/keto reductase id=2635329 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
aldo/keto reductase family oxidoreductase Tax=GWF1_Rhodobacteraceae_65_7_curated
aldo/keto reductase family oxidoreductase
scnpilot_p_inoc_scaffold_314_85
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82229..83077
DNA (849bp) protein (283aa)
Putative RTX toxin n=1 Tax=Roseovarius sp. 217 RepID=A3W655_9RHOB
Putative RTX toxin {ECO:0000313|EMBL:EAQ24050.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
outer membrane adhesin-like protein
scnpilot_p_inoc_scaffold_314_86
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83081..84034)
DNA (954bp) protein (318aa)
Putative uncharacterized protein id=2635325 bin=GWF1_Rhodobacteraceae_65_7 species=Citreicella sp. SE45 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_314_87
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84031..84765)
DNA (735bp) protein (245aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64) rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00472}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000255|HAMAP-Rule:MF_00472}; EC=2.1.1.222 {ECO:0000255|HAMAP-Rule:MF_00472};
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F5LZY6_RHOSH rbh
scnpilot_p_inoc_scaffold_314_88
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84816..85799
DNA (984bp) protein (328aa)
proline iminopeptidase (EC:3.4.11.5); K01259 proline iminopeptidase [EC:3.4.11.5] Tax=GWF1_Rhodobacteraceae_65_7_curated
Proline iminopeptidase id=2635321 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Proline iminopeptidase
scnpilot_p_inoc_scaffold_314_89
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85800..86285
DNA (486bp) protein (162aa)
CrtK n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B71482
CrtK {ECO:0000313|EMBL:KDB03535.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
TspO and MBR like proteins
scnpilot_p_inoc_scaffold_314_90
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86305..88176)
DNA (1872bp) protein (624aa)
Hemolysin-type calcium-binding region (Fragment) n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LDG2_9PROT
hemolysin-type calcium-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hemolysin-type calcium-binding protein
Displaying items 61-90 of 172 in total

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