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scnpilot_p_inoc_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_314_1
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..156
DNA (156bp) protein (52aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=371731 s
galU; UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWX7_9RHOB
scnpilot_p_inoc_scaffold_314_2
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198..1403
DNA (1206bp) protein (402aa)
glycosyl transferase (EC:2.4.1.-) Tax=GWF1_Rhodobacteraceae_65_7_curated
glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase group 1 id=2518583 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_314_3

Not on your lists

1599..2447
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AVI1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD60478.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_314_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2458..4155
DNA (1698bp) protein (566aa)
family 14 glycosyl transferase (EC:2.4.1.-) Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Glycosyl transferase family 14 n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWY0_9RHOB rbh
core-2/I-branching enzyme family protein
scnpilot_p_inoc_scaffold_314_5
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4187..5554
DNA (1368bp) protein (456aa)
Glycosyl transferase family 14 id=2518590 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=CG_Rhodob_01
hypothetical protein
scnpilot_p_inoc_scaffold_314_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5558..6022)
DNA (465bp) protein (155aa)
PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=GWF1_Rhodobacteraceae_65_7_curated
Putative PTS IIA-like nitrogen-regulatory protein PtsN id=2518594 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
PTS IIA-like nitrogen-regulatory protein PtsN
scnpilot_p_inoc_scaffold_314_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6056..6631)
DNA (576bp) protein (192aa)
Sigma 54 modulation protein / SSU ribosomal protein S30P id=2518597 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
sigma 54 modulation protein/ribosomal protein S30EA Tax=GWF1_Rhodobacteraceae_65_7_curated
sigma 54 modulation protein/ribosomal protein S30EA
scnpilot_p_inoc_scaffold_314_8
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6872..7624)
DNA (753bp) protein (251aa)
ABC transporter, ATPase subunit (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EML7_9RHOB rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW62351.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodo
scnpilot_p_inoc_scaffold_314_9
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7624..8115)
DNA (492bp) protein (164aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5C7_9RHOB
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EEW23799.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
OstA family protein
scnpilot_p_inoc_scaffold_314_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8128..8727)
DNA (600bp) protein (200aa)
Putative uncharacterized protein id=2518609 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein; K11719 lipopolysaccharide export system protein LptC Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_314_11
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8731..9696)
DNA (966bp) protein (322aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:EEW23801.1}; EC=5.3.1.13 {ECO:0000313|EMBL:EEW23801.1};; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
KpsF/GutQ family protein (EC:5.3.1.13) rbh
KpsF/GutQ family protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5C9_9RHOB rbh
scnpilot_p_inoc_scaffold_314_12
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9677..10291)
DNA (615bp) protein (205aa)
3'-5' exonuclease n=2 Tax=Rhodobacter RepID=A3PNJ9_RHOS1 rbh
3'-5' exonuclease rbh
Ribonuclease D related protein {ECO:0000313|EMBL:EKX58222.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacte
scnpilot_p_inoc_scaffold_314_13
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10417..11439)
DNA (1023bp) protein (341aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=GWF1_Rhodobacteraceae_65_7_curated
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=2429187 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_314_14
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11509..12126)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036B74F1
Uncharacterized protein {ECO:0000313|EMBL:KGJ07758.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus
hypothetical protein
scnpilot_p_inoc_scaffold_314_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12123..13253)
DNA (1131bp) protein (377aa)
Capsule polysaccharide biosynthesis protein id=2429183 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
capsule polysaccharide biosynthesis Tax=GWF1_Rhodobacteraceae_65_7_curated
polysaccharide synthesis/modification protein
scnpilot_p_inoc_scaffold_314_16
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13305..14477)
DNA (1173bp) protein (391aa)
Major facilitator transporter n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F5M1Q0_RHOSH rbh
Major facilitator superfamily (MFS) transporter
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA80553.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
scnpilot_p_inoc_scaffold_314_17
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14477..15712)
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 id=2429147 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
major facilitator superfamily transporter Tax=GWF1_Rhodobacteraceae_65_7_curated
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_314_18
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15927..17525
DNA (1599bp) protein (533aa)
family 13 glycosyl hydrolase (EC:3.2.1.-); K01187 alpha-glucosidase [EC:3.2.1.20] Tax=GWF1_Rhodobacteraceae_65_7_curated
Glycosyl hydrolase, family 13 id=2429145 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
alpha amylase catalytic subunit rbh
scnpilot_p_inoc_scaffold_314_19
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17529..18017)
DNA (489bp) protein (163aa)
GCN5-related N-acetyltransferase id=2429143 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
acetyltransferase-like protein Tax=GWF1_Rhodobacteraceae_65_7_curated
acetyltransferase-like protein
scnpilot_p_inoc_scaffold_314_20
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18007..18507)
DNA (501bp) protein (167aa)
GreA/GreB family elongation factor id=2429140 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
transcription elongation factor Tax=GWF1_Rhodobacteraceae_65_7_curated
GreA/GreB family elongation factor
scnpilot_p_inoc_scaffold_314_21
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18504..18950)
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=2429136 bin=GWF1_Rhodobacteraceae_65_7 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
NUDIX hydrolase, MutT
scnpilot_p_inoc_scaffold_314_22
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18967..19743
DNA (777bp) protein (259aa)
Lipase (EC:3.1.1.3)
Acetyltransferase and hydrolase with the alpha/beta hydrolase fold-like protein id=2429133 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
lipase Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_314_23
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19798..21276)
DNA (1479bp) protein (493aa)
Succinate-semialdehyde dehdyrogenase {ECO:0000313|EMBL:ESW60549.1}; EC=1.2.1.16 {ECO:0000313|EMBL:ESW60549.1};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; R
gabD4; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
Succinate-semialdehyde dehdyrogenase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EJX9_9RHOB rbh
scnpilot_p_inoc_scaffold_314_24
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21395..21724)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1L9_9RHOB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
scnpilot_p_inoc_scaffold_314_25
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21758..23794)
DNA (2037bp) protein (679aa)
OmpA/MotB domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1L8_9RHOB rbh
OmpA/MotB domain-containing protein; K03286 OmpA-OmpF porin, OOP family Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
putative outer membrane protein, OmpA family rbh
scnpilot_p_inoc_scaffold_314_26
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23856..24830)
DNA (975bp) protein (325aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00188627}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00188633};; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
4-hydroxybenzoate polyprenyltransferase (EC:2.5.1.39)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B4B68A rbh
scnpilot_p_inoc_scaffold_314_27
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24845..25570
DNA (726bp) protein (242aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=GWF1_Rhodobacteraceae_65_7_curated
Ribosomal RNA small subunit methyltransferase E id=2934230 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
16S ribosomal RNA methyltransferase RsmE
scnpilot_p_inoc_scaffold_314_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25591..26115
DNA (525bp) protein (175aa)
Putative uncharacterized protein id=2934229 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_314_29
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26171..27520
DNA (1350bp) protein (450aa)
hypothetical protein; K01919 glutamate--cysteine ligase [EC:6.3.2.2] Tax=GWF1_Rhodobacteraceae_65_7_curated
Glutamate/cysteine ligase id=2934228 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein rbh
scnpilot_p_inoc_scaffold_314_30
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27554..28159)
DNA (606bp) protein (202aa)
glycerol-3-phosphate acyltransferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B386EC rbh
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:000025
hypothetical protein
Displaying items 1-30 of 172 in total

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