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scnpilot_p_inoc_scaffold_314_9

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(7624..8115)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5C7_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 162.0
  • Bit_score: 219
  • Evalue 2.20e-54
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EEW23799.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 162.0
  • Bit_score: 219
  • Evalue 3.10e-54
OstA family protein similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 160.0
  • Bit_score: 205
  • Evalue 1.60e-50

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Taxonomy

Rhodobacter sp. SW2 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGCGCTGCCGCCCCCTTCTTGCCCTCGCCCTGAGCTGCCTGCTTCTGCCGGTCGCCGCAGGCGCGCAGCAGGCGAATATCGCATTTGGCGGGCTAAAGCAGGATACCAGCCTGCCAGTGCAGGTGGAGGCCGATAACCTGACCGTCGAACAGGCCACCGGCACCGCAGTATTCAGCGGCAATGTCCGGGTGGCGCAGGGGGATCTGAAACTCGCCGCTGCGCGGGTGCAGGTAGAATATGCCGCCGACGGCAAGGCCATCGAGCGGCTGCATGCCTCGGGCGGCGTGACCATGGCCAATGCGACCGACGCGGCCGAGTCGAAAGAGGCGGTCTACACCATCGGCTCCGGCAATCTGGTGATGACGGGCGATGTTCTGCTGACCCAGGGCAAAAGCGCCATTGCCGGGCAGAAGCTGGTGATCGACCTCAAGGCAGGGACCGGCACCATGCAGGGGCGGGTCTCCACCACCTTTGTGCCGGGCAACAAGTGA
PROTEIN sequence
Length: 164
MRCRPLLALALSCLLLPVAAGAQQANIAFGGLKQDTSLPVQVEADNLTVEQATGTAVFSGNVRVAQGDLKLAAARVQVEYAADGKAIERLHASGGVTMANATDAAESKEAVYTIGSGNLVMTGDVLLTQGKSAIAGQKLVIDLKAGTGTMQGRVSTTFVPGNK*