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scnpilot_p_inoc_scaffold_319

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Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_319_1
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(810..2036)
DNA (1227bp) protein (409aa)
selenocysteine lyase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=GWF1_Rhodobacteraceae_65_7_curated
cysteine desulfurase (EC:2.8.1.7) rbh
Cysteine desulfurase id=2432881 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_319_2
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2033..2515)
DNA (483bp) protein (161aa)
Putative uncharacterized protein id=2432883 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_319_3
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2517..3794)
DNA (1278bp) protein (426aa)
FeS assembly protein SufD id=2432885 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
SufBD protein; K09015 Fe-S cluster assembly protein SufD Tax=GWF1_Rhodobacteraceae_65_7_curated
SufBD protein
scnpilot_p_inoc_scaffold_319_4
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3794..4549)
DNA (756bp) protein (252aa)
FeS assembly ATPase SufC id=2432887 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
sufC; FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
SufC; Suf C, ATPase rbh
scnpilot_p_inoc_scaffold_319_5
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4558..4872)
DNA (315bp) protein (105aa)
hypothetical protein OS124_04761 id=2432890 bin=GWF1_Rhodobacteraceae_65_7 species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_319_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4869..6389)
DNA (1521bp) protein (507aa)
Cysteine desulfurase activator complex subunit SufB id=2432929 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB Tax=GWF1_Rhodobacteraceae_65_7_curated
cysteine desulfurase activator complex subunit SufB rbh
scnpilot_p_inoc_scaffold_319_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6394..7446)
DNA (1053bp) protein (351aa)
cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=GWF1_Rhodobacteraceae_65_7_curated
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase id=2432931 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_319_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7443..8810)
DNA (1368bp) protein (456aa)
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=GWF1_Rhodobacteraceae_65_7_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=2432932 bin=GWF1_Rhodobacteraceae_65_7 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_319_9
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8930..9520)
DNA (591bp) protein (197aa)
Outer membrane protein id=2432933 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
putative outer membrane protein Tax=GWF1_Rhodobacteraceae_65_7_curated
outer membrane protein
scnpilot_p_inoc_scaffold_319_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9640..11448)
DNA (1809bp) protein (603aa)
Elongation factor 3 n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPD8_9RHOB rbh
ABC transporter-like protein; K15738 ATP-binding cassette, subfamily F, uup Tax=GWF1_Rhodobacteraceae_65_7_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_319_11
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11483..12241)
DNA (759bp) protein (253aa)
Ornithine-acyl[acyl carrier protein] N-acyltransferase id=2432935 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
putative hemolysin-like protein Tax=GWF1_Rhodobacteraceae_65_7_curated
putative hemolysin-like protein
scnpilot_p_inoc_scaffold_319_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12319..12831)
DNA (513bp) protein (171aa)
SmpA/OmlA domain protein id=2432937 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
SmpA/OmlA domain-containing protein Tax=GWF1_Rhodobacteraceae_65_7_curated
SmpA/OmlA domain-containing protein
scnpilot_p_inoc_scaffold_319_13
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12961..13527
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=2432938 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_319_14
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13692..13898
DNA (207bp) protein (69aa)
50S ribosomal protein L32 n=5 Tax=Rhodobacter RepID=RL32_RHOS1
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter
scnpilot_p_inoc_scaffold_319_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13923..15023
DNA (1101bp) protein (367aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=GWF1_Rhodobacteraceae_65_7_curated
Phosphate acyltransferase id=2432940 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
putative glycerol-3-phosphate acyltransferase PlsX
scnpilot_p_inoc_scaffold_319_16
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15020..15991
DNA (972bp) protein (324aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=GWF1_Rhodobacteraceae_65_7_curated
fabH-2; 3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=2432942 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_319_17
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16136..16438
DNA (303bp) protein (101aa)
Integration host factor subunit alpha n=5 Tax=Rhodobacter RepID=IHFA_RHOS1
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=501479 species="Bacteria; Proteobacter
scnpilot_p_inoc_scaffold_319_18
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16453..17307
DNA (855bp) protein (285aa)
Transcriptional regulator, MerR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZM0_9RHOB
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEW25817.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rho
trancriptional regulator, MerR family
scnpilot_p_inoc_scaffold_319_19
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17516..18595
DNA (1080bp) protein (360aa)
2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13) rbh
2-deoxycytidine 5-triphosphate deaminase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZL9_9RHOB rbh
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:EEW25816.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="R
scnpilot_p_inoc_scaffold_319_20
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18674..18886)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZL8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25815.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW
scnpilot_p_inoc_scaffold_319_21
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18891..19532)
DNA (642bp) protein (214aa)
Segregation and condensation protein B n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EM35_9RHOB rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="
scpB; segregation and condensation protein B rbh
scnpilot_p_inoc_scaffold_319_22
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19529..20323)
DNA (795bp) protein (265aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPI6_9RHOB rbh
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:ESW62067.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter
Condensin subunit ScpA rbh
scnpilot_p_inoc_scaffold_319_23
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20316..21317)
DNA (1002bp) protein (334aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
beta-N-acetylhexosaminidase (EC:3.2.1.52) rbh
Beta-N-acetylhexosaminidase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZL5_9RHOB rbh
scnpilot_p_inoc_scaffold_319_24
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21314..22387)
DNA (1074bp) protein (358aa)
Sporulation domain protein id=3047011 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
sporulation domain-containing protein Tax=GWF1_Rhodobacteraceae_65_7_curated
sporulation domain-containing protein
scnpilot_p_inoc_scaffold_319_25
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22457..24199)
DNA (1743bp) protein (581aa)
argS; arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=GWF1_Rhodobacteraceae_65_7_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=3047007 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_319_26
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24251..24544)
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=3047005 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Putative uncharacterized protein Tax=GWF1_Rhodobacteraceae_65_7_curated
scnpilot_p_inoc_scaffold_319_27
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24535..25146)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FPY2_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU46272.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermuden
hypothetical protein
scnpilot_p_inoc_scaffold_319_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25216..25671)
DNA (456bp) protein (152aa)
Cytochrome c-type biogenesis protein CcmE id=3046996 bin=GWF1_Rhodobacteraceae_65_7 species=Ruegeria lacuscaerulensis genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=GWF1_Rhodobacteraceae_65_7_curated
cycJ; cytochrome C-type biogenesis protein, CcmE
scnpilot_p_inoc_scaffold_319_29
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25682..26710)
DNA (1029bp) protein (343aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWF1_Rhodobacteraceae_65_7_curated
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38) rbh
N-acetyl-gamma-glutamyl-phosphate reductase id=3046995 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_319_30
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26773..27540)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XZI4_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT10702.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminoph
Displaying items 1-30 of 117 in total

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