ggKbase home page

scnpilot_p_inoc_scaffold_506

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_506_1
Paracoccus sp. SY, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1592)
DNA (1590bp) protein (530aa)
AioA {ECO:0000313|EMBL:AKE49356.1}; Arsenite oxidase large subunit {ECO:0000313|EMBL:AJA37538.1}; EC=1.20.9.1 {ECO:0000313|EMBL:AJA37538.1};; TaxID=1330255 species="Bacteria; Proteobacteria; Alphaprot
Arsenite oxidase large subunit n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EI53_9RHOB
arsenite oxidase, large subunit
scnpilot_p_inoc_scaffold_506_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1603..2127)
DNA (525bp) protein (175aa)
arsenite oxidase, small subunit; K08355 arsenite oxidase small subunit [EC:1.20.9.1] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Arsenite oxidase small subunit n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIW8_9RHOB rbh
arsenite oxidase, small subunit
scnpilot_p_inoc_scaffold_506_3
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2299..3507)
DNA (1209bp) protein (403aa)
Fis family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EFN3_9RHOB rbh
Fis family transcriptional regulator {ECO:0000313|EMBL:ESW59941.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhod
two component sigma54 specific Fis family transcriptional regulator
scnpilot_p_inoc_scaffold_506_4
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..4927)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
putative sensor histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIF6_9RHOB rbh
scnpilot_p_inoc_scaffold_506_5
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4924..5784)
DNA (861bp) protein (287aa)
Phosphonate ABC transporter substrate-binding protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HGY2_RHOCA rbh
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI26064.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobact
phosphate/phosphonate ABC transporter
scnpilot_p_inoc_scaffold_506_6
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5915..6238
DNA (324bp) protein (108aa)
Transcriptional regulator, ArsR family n=2 Tax=Rhodobacter capsulatus RepID=D5AVK0_RHOCB
ArsR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_506_7
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6235..7254
DNA (1020bp) protein (340aa)
Arsenic transporter n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EFA1_9RHOB rbh
Arsenic transporter {ECO:0000313|EMBL:ESW59623.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA
arsB; arsenite export protein
scnpilot_p_inoc_scaffold_506_8
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7251..7679
DNA (429bp) protein (143aa)
arsenate reductase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FBD1
arsenate reductase
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_506_9
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7672..8400
DNA (729bp) protein (243aa)
NADPH-dependent FMN reductase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036A3DF8 rbh
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KFI26067.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobac
arsenical resistance protein ArsH
scnpilot_p_inoc_scaffold_506_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8403..9203)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4X0J7_RHOS5
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
scnpilot_p_inoc_scaffold_506_11
Commensalibacter sp. MX01, Commensalibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9228..9551)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035EFA55
UPF0060 membrane protein COMX_06070 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1208583 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibac
hypothetical protein
scnpilot_p_inoc_scaffold_506_12
unknown

Not on your lists

comp(9704..9850)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_506_13
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10057..11118
DNA (1062bp) protein (354aa)
Permease n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4J5_9RHOB rbh
Permease {ECO:0000313|EMBL:EEW24078.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
putative transporter
scnpilot_p_inoc_scaffold_506_14
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11130..11360
DNA (231bp) protein (77aa)
Glutaredoxin n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4J6_9RHOB
thioredoxin family protein Tax=CG_Rhodob_01
thioredoxin family protein
scnpilot_p_inoc_scaffold_506_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11372..11839
DNA (468bp) protein (156aa)
rhodanese domain-containing protein (EC:2.8.1.-)
Rhodanese domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S4J7_9RHOB
Rhodanese domain protein {ECO:0000313|EMBL:EEW24080.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. S
scnpilot_p_inoc_scaffold_506_16
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11877..12281
DNA (405bp) protein (135aa)
Putative OsmC family protein n=1 Tax=Rhizobium sp. RepID=L0NLV1_RHISP
Osmotically inducible protein C {ECO:0000313|EMBL:KEO60107.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava s
OsmC family protein
scnpilot_p_inoc_scaffold_506_17
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12286..13185
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8G1_9RHIZ rbh
cation efflux family protein; K03295 cation efflux system protein, CDF family Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_506_18
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..14423
DNA (951bp) protein (317aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IW17_POLGS rbh
phosphonate ABC transporter substrate-binding protein rbh
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ADZ70299.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorp
scnpilot_p_inoc_scaffold_506_19
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14490..15311
DNA (822bp) protein (274aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pol
phosphonate ABC transporter ATP-binding protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B37578 rbh
phosphonate ABC transporter ATPase
scnpilot_p_inoc_scaffold_506_20
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15308..16108
DNA (801bp) protein (267aa)
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WXN3_RHOS5 rbh
Phosphonate ABC transporter permease protein phnE2
Phosphonate ABC transporter permease protein phnE2 {ECO:0000313|EMBL:AHM05441.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacteriu
scnpilot_p_inoc_scaffold_506_21
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16105..16908
DNA (804bp) protein (268aa)
Phosphonate ABC transporter, permease protein, putative n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IW20_POLGS rbh
phosphonate ABC transporter permease rbh
Phosphonate ABC transporter, permease protein, putative {ECO:0000313|EMBL:ADZ70302.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (s
scnpilot_p_inoc_scaffold_506_22
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17054..18037
DNA (984bp) protein (328aa)
Phosphate binding protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PKL5_9RHIZ rbh
Phosphate binding protein {ECO:0000313|EMBL:EKF61513.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;
phosphate binding protein
scnpilot_p_inoc_scaffold_506_23
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18184..19035
DNA (852bp) protein (284aa)
Phosphate ABC transporter permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2R102_9RHIZ rbh
Phosphate ABC transporter permease {ECO:0000313|EMBL:EKF61512.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agroba
phosphate ABC transporter permease
scnpilot_p_inoc_scaffold_506_24
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19035..19988
DNA (954bp) protein (318aa)
Phosphate ABC transporter permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QJZ4_9RHIZ rbh
Phosphate ABC transporter permease {ECO:0000313|EMBL:EKF61511.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agroba
phosphate ABC transporter permease
scnpilot_p_inoc_scaffold_506_25
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20003..20848
DNA (846bp) protein (282aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATPase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8H8_9RHIZ rbh
phosphate ABC transporter ATPase
scnpilot_p_inoc_scaffold_506_26
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20864..21535
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037E5FDD
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rueg
phosphate uptake regulator
scnpilot_p_inoc_scaffold_506_27
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21550..22257
DNA (708bp) protein (236aa)
chemotaxis protein CheY n=1 Tax=Paracoccus sp. N5 RepID=UPI00037E9F3C
winged helix family two component transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=GWF1_Rhodobacteraceae_65_7_curated
phosphate regulon transcriptional regulatory protein PhoB
scnpilot_p_inoc_scaffold_506_28
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22359..23192
DNA (834bp) protein (278aa)
Wenxma_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ67503.1}; EC=1.20.4.1 {ECO:0000313|EMBL:KIQ67503.1};; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003782102 rbh
transcriptional regulator/arsenate reductase
scnpilot_p_inoc_scaffold_506_29
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23246..24091
DNA (846bp) protein (282aa)
ArsR family transcriptional regulator/protein tyrosine phosphatase (EC:3.1.3.48)
ArsR family transcriptional regulator n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EHC2_9RHOB rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESW59624.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rho
scnpilot_p_inoc_scaffold_506_30
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24096..25103
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
gap4; glyceraldehyde-3-phosphate dehydrogenase-4 (phosphorylating) (EC:1.2.1.12) rbh
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EI40_9RHOB rbh
Displaying items 1-30 of 80 in total

View Taxonomy