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scnpilot_p_inoc_scaffold_622

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Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_622_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..494
DNA (492bp) protein (164aa)
integrase/recombinase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289EEB7
site-specific recombinase XerD Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
site-specific recombinase XerD
scnpilot_p_inoc_scaffold_622_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

446..1048
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKT8_AFIFE
site-specific recombinase XerD Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
site-specific recombinase XerD
scnpilot_p_inoc_scaffold_622_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1045..2010
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEL2_AFIFE
tyrosine recombinase XerD Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
tyrosine recombinase XerD
scnpilot_p_inoc_scaffold_622_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2003..3013
DNA (1011bp) protein (337aa)
integrase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287AE65 rbh
tyrosine recombinase XerC Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
tyrosine recombinase XerC
scnpilot_p_inoc_scaffold_622_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3087..3263)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=C6KUZ5_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
scnpilot_p_inoc_scaffold_622_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3712..4050)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3P4_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ72180.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 /
scnpilot_p_inoc_scaffold_622_7
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4050..4310)
DNA (261bp) protein (87aa)
Putative plasmid stabilization system antidote protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RNM8_9RHOB
Addiction module antitoxin {ECO:0000313|EMBL:KJV08389.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis
putative plasmid stabilization system antidote protein
scnpilot_p_inoc_scaffold_622_8
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4417..4890)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F515
Uncharacterized protein {ECO:0000313|EMBL:EEW25020.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW
hypothetical protein
scnpilot_p_inoc_scaffold_622_9
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4990..7182)
DNA (2193bp) protein (731aa)
ParB domain protein nuclease id=3002239 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
DNA-binding protein {ECO:0000313|EMBL:KJS44110.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c
ParB family protein
scnpilot_p_inoc_scaffold_622_10
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7333..8469)
DNA (1137bp) protein (379aa)
Replication protein C n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1S4_9RHOB rbh
Replication protein C {ECO:0000313|EMBL:EEW25022.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.
repC; plasmid replication protein RepC
scnpilot_p_inoc_scaffold_622_11
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8742..9698)
DNA (957bp) protein (319aa)
Plasmid partitioning protein RepB id=3002222 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
plasmid partitioning protein RepB Tax=GWF1_Rhodobacteraceae_65_7_curated
plasmid partitioning protein RepB
scnpilot_p_inoc_scaffold_622_12
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9688..10896)
DNA (1209bp) protein (403aa)
Plasmid partitioning protein RepA n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1S6_9RHOB rbh
Plasmid partitioning protein RepA {ECO:0000313|EMBL:EEW25024.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobac
plasmid partitioning protein RepA
scnpilot_p_inoc_scaffold_622_13
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11340..12371)
DNA (1032bp) protein (344aa)
Resolvase domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1S7_9RHOB rbh
DNA invertase {ECO:0000313|EMBL:KJS44111.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
resolvase domain-containing protein
scnpilot_p_inoc_scaffold_622_14
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12456..13523
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EBI2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDQ03740.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indo
hypothetical protein
scnpilot_p_inoc_scaffold_622_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13680..15227
DNA (1548bp) protein (516aa)
Extracellular solute-binding protein family 5 n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1T5_9RHOB rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EEW25033.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
nickel ABC transporter periplasmic ligand binding protein
scnpilot_p_inoc_scaffold_622_16
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15250..16191
DNA (942bp) protein (314aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1T6_9RHOB rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEW25034.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
nickel ABC transporter inner membrane protein
scnpilot_p_inoc_scaffold_622_17
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16202..17095
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1T7_9RHOB rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEW25035.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobactera
binding--dependent transport system inner membrane component family protein
scnpilot_p_inoc_scaffold_622_18
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17092..18096
DNA (1005bp) protein (335aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1T8_9RHOB rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EEW25036.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacte
hypothetical protein
scnpilot_p_inoc_scaffold_622_19
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18089..19060
DNA (972bp) protein (324aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1T9_9RHOB
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EEW25037.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacte
hypothetical protein
scnpilot_p_inoc_scaffold_622_20
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19063..19794
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1U0_9RHOB rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEW25038.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rho
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_622_21
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19850..20737)
DNA (888bp) protein (296aa)
Transmembrane anchor protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EFX4_9RHOB rbh
Transmembrane anchor protein {ECO:0000313|EMBL:ESW59144.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter
hypothetical protein
scnpilot_p_inoc_scaffold_622_22
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20753..21478)
DNA (726bp) protein (242aa)
Putative ORF1 (Plasmid pTOM9) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1U5_9RHOB rbh
Putative ORF1 (Plasmid pTOM9) {ECO:0000313|EMBL:EEW25043.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" s
membrane protein
scnpilot_p_inoc_scaffold_622_23
unknown

Not on your lists

comp(21547..21903)
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_622_24
bacterium YEK0313, Bacteria

Not on your lists

22124..22402
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUQ8_9RHIZ
Copper-sensing transcriptional repressor CsoR {ECO:0000313|EMBL:CEJ15994.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
scnpilot_p_inoc_scaffold_622_25
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22410..23846
DNA (1437bp) protein (479aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1U3_9RHOB rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEW25041.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" so
transmembrane efflux protein
scnpilot_p_inoc_scaffold_622_26
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23867..25171
DNA (1305bp) protein (435aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1U2_9RHOB rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEW25040.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacte
major facilitator transporter
scnpilot_p_inoc_scaffold_622_27
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25226..25819)
DNA (594bp) protein (198aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7ER45_9RHOB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
hypothetical protein
scnpilot_p_inoc_scaffold_622_28
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26003..26497)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EN62_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW62468.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_p_inoc_scaffold_622_29
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26607..26942)
DNA (336bp) protein (112aa)
UPF0060 membrane protein Rsw2DRAFT_2026 n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1U8_9RHOB
UPF0060 membrane protein Rsw2DRAFT_2026 {ECO:0000256|HAMAP-Rule:MF_00010}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rh
membrane protein
scnpilot_p_inoc_scaffold_622_30
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27022..27585)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI26365.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein id=3002093 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacterales bacterium Y4I genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Displaying items 1-30 of 64 in total

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