ggKbase home page

scnpilot_p_inoc_scaffold_867

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_867_1

Not on your lists

comp(222..608)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AIV0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD61621.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_867_2

Not on your lists

comp(624..737)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A0Q2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD61620.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_867_3
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(817..1320)
DNA (504bp) protein (168aa)
Putative uncharacterized protein id=2479311 bin=GWF1_Rhodobacteraceae_65_7 species=Roseovarius sp. 217 genus=Roseovarius taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
calcium-binding EF-hand-containing protein Tax=GWF1_Rhodobacteraceae_65_7_curated
calcium-binding EF-hand-containing protein
scnpilot_p_inoc_scaffold_867_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1502..2227
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BHX0_9BACT rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
two component transcriptional regulator
scnpilot_p_inoc_scaffold_867_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2224..3627
DNA (1404bp) protein (468aa)
sensor histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Histidine kinase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1S9_9RHOB rbh
Signal transduction histidine kinase
scnpilot_p_inoc_scaffold_867_6

Not on your lists

comp(4162..5118)
DNA (957bp) protein (319aa)
ISMca7 transposase n=1 Tax=uncultured bacterium RepID=C6KU97_9BACT rbh
ISMca7 transposase {ECO:0000313|EMBL:BAH89545.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase IS4 family protein
scnpilot_p_inoc_scaffold_867_7
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5467..6189
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JRQ7_9RHOB
phosphoesterase PA-phosphatase-like protein
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_p_inoc_scaffold_867_8
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6709..6987
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Halomonas smyrnensis RepID=UPI0002ECFA44
Uncharacterized protein {ECO:0000313|EMBL:KIX17561.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361
Lipid A biosynthesis, N-terminal
scnpilot_p_inoc_scaffold_867_9
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6984..8540
DNA (1557bp) protein (519aa)
Glycosyltransferase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YFN2_PARAH rbh
Glycosyltransferase {ECO:0000313|EMBL:KFE33971.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;
glycosyltransferase
scnpilot_p_inoc_scaffold_867_10
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8537..9298
DNA (762bp) protein (254aa)
Dolichol-phosphate mannosyltransferase n=1 Tax=uncultured bacterium RepID=K2AYN4_9BACT
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:EYD74667.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source
dolichol-phosphate mannosyltransferase
scnpilot_p_inoc_scaffold_867_11

Not on your lists

9383..11359
DNA (1977bp) protein (659aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=uncultured bacterium RepID=K2AJN1_9BACT rbh
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EKD61926.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phosphoesterase, PA-phosphatase-like protein
scnpilot_p_inoc_scaffold_867_12

Not on your lists

comp(11425..12186)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F8Y9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE18032.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_867_13
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12210..12845)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1X0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25068.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
putative signal peptide protein
scnpilot_p_inoc_scaffold_867_14
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13139..13888
DNA (750bp) protein (250aa)
ABC transporter related protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1X8_9RHOB rbh
ABC transporter related protein {ECO:0000313|EMBL:EEW25076.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacte
ABC transporter
scnpilot_p_inoc_scaffold_867_15
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13888..14820
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1X9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EEW25077.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW
hypothetical protein
scnpilot_p_inoc_scaffold_867_16
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14810..15802
DNA (993bp) protein (331aa)
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Y0_9RHOB rbh
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein {ECO:0000313|EMBL:EEW25078.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria;
multi-copper enzyme maturation ABC transporter permease-like protein
scnpilot_p_inoc_scaffold_867_17
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15819..16439
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Y1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25079.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source=
hypothetical protein
scnpilot_p_inoc_scaffold_867_18
unknown

Not on your lists

16639..17280
DNA (642bp) protein (214aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_867_19
unknown

Not on your lists

17391..17639
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_867_20
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17716..20364
DNA (2649bp) protein (883aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000364DEC9 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAQ69404.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidoph
hypothetical protein
scnpilot_p_inoc_scaffold_867_21
unknown

Not on your lists

comp(20411..20608)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_867_22
unknown

Not on your lists

20793..21023
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_867_23
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21124..21795
DNA (672bp) protein (224aa)
Two-component response regulator n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAG1_9RHOB rbh
two-component response regulator
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_p_inoc_scaffold_867_24
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21800..23170
DNA (1371bp) protein (457aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Sensory histidine protein kinase n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SXT8_9RHOB rbh
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_p_inoc_scaffold_867_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23200..23778
DNA (579bp) protein (193aa)
Tyrosine/serine protein phosphatase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPU6_9RHIZ
Tyrosine/serine protein phosphatase {ECO:0000313|EMBL:EYR83379.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD1
hypothetical protein
scnpilot_p_inoc_scaffold_867_26
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23953..24495
DNA (543bp) protein (181aa)
ChrB domain-containing protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HSL4_9SPHN rbh
ChrB domain-containing protein {ECO:0000313|EMBL:EQB15128.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
ChrB domain-containing protein
scnpilot_p_inoc_scaffold_867_27
unknown

Not on your lists

24504..24734
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_867_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24727..25980
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003669780 rbh
MFS transporter {ECO:0000313|EMBL:KJZ45556.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_867_29
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26308..27381)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EBI2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EDQ03740.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indo
hypothetical protein
scnpilot_p_inoc_scaffold_867_30
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27608..28492
DNA (885bp) protein (295aa)
resolvase n=1 Tax=Martelella mediterranea RepID=UPI000365427B rbh
resolvase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
resolvase domain-containing protein
Displaying items 1-30 of 38 in total

View Taxonomy