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scnpilot_p_inoc_scaffold_69_43

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(44789..46429)

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine transporter OpuD n=1 Tax=Citreicella sp. SE45 RepID=D0D2C9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 547.0
  • Bit_score: 890
  • Evalue 7.30e-256
  • rbh
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:KFE36137.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioc similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 546.0
  • Bit_score: 989
  • Evalue 1.60e-285
High-affinity choline uptake protein BetT similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 542.0
  • Bit_score: 826
  • Evalue 6.30e-237

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Taxonomy

Thioclava sp. 13D2W-2 → Thioclava → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGGCCGAGTCCGGCGACACGCAGGGCATACCCGCGCCCGAAGGCGCGACACAGATCATTGATACCGAATATGAAATCGGACAACACAATATCGAGGGCAACCTCGGCCCCCTGGGGTTTGACATCCACAACCCGGTCTTTCTGGTTTCGGCCCTGTCGGTCGTGGCCTTTGTGTTTTACGCCCTTGCACTGCCCGAACAGGCGGGCGCGGCTTTCGGCTGGCTCCGCCCCTGGCTGACCTCCACCTTTGACTGGTTCTTCATGATCGCCGCGAACATCTTCGTGGTGTTCTGCCTTGTGCTGATCGTCAGCCCTTGGGGCAATGTCCGGCTGGGCGGGCGCGATGCGACGCCGGATTACAGCTACACCGGCTGGTTCGCCATGCTGTTCGCAGCCGGGATGGGCATCGGGCTGATGTTCTTCGGCGTGCTGGAGCCGGTCTATCACATGGCGATTTCCGCCCCGCTGGGCACACCCTCGCCCTTTGACGAGGCAGGCAACCTGATTCCGGAAAATGTGGACCGGGCGAAGGCGATGGGCCTTGCCGCGACGATCTATCACTGGGGTCTGCACCCCTGGGCGATCTATGCCGTGGTCGCGCTGGCGCTGGCGCTGTTTTCCTTCAACAAGGGTCTGCCACTGACCATCCGTTCCGCCTTTTACCCGATCTTCGGCGAAAGGATCTGGGGCTGGACCGGGCATATCATCGACATTCTGGCCGTCTTCGCCACGCTGTTCGGCCTTGCCACCAGCCTCGGCTTCGGCGCGCAACAGGCGAATGCCGGTCTGAACCATGTCTTCGGCATTCCGGTCGACACCACGGTGCAGGTCATCCTGATCACGCTGATCACCGGCGTCGCCCTGTTTTCGGTGCTGCGCGGGCTGGATGGCGGGGTGAAGCTGCTGTCAGAGATCAACATGGGCATCGCAGCACTGCTGCTGCTGTTCGTGCTGCTCGCCGGGCCGACACTGGCCATTCTGGGCGATTTCGGGCAGGGGCTTCTGGCCTATGCGCAGGATCTCGTGCCGCTGTCGAACCCCTTCGGCCGTTCGGATGACGATTACCGCGAGGGCTGGACGGCGTTCTACTGGGCATGGTGGATCAGCTGGTCGCCGTTTGTCGGCATGTTCATCGCGCGGGTTTCGCGCGGCCGGACGGTGCGCGAGTTCATCACCTGTGTCCTCATCATTCCCTCGCTGGTCTGCGTGCTGTGGATGGCCGTCTTCGGCGGCGTGGCGATTGATCAGGTTCTGACGGACCCCGCCACTTCGGCGGTGAAGGCTCAGGTCATCGACAATTACGACCCGCCGCTGTCCCTGTTCGCAATGCTGGAGGGATTGCCGCTCAGTTCCATCACCTCGGTCATCGCCATTGTGCTGGTCATCGTGTTCTTCGTCACCTCGTCGGATTCCGGCTCGCTGGTGATCGACACGATCACGGCGGGCGGCAAGGTCGATGCGCCCATGCCGCAGCGCGTGTTCTGGGCAACGTTCGAGGGCGCGGTGGCCATCGTGCTGCTGGTCGGTGGTGGCCTCGGCGCCTTGCAGGCCATGGTGATCTCGACCGGGCTGCCCTTTGCGCTGGTCCTGCTGCTGATGTGCTGGGCCGTGCTGAAGGGGCTGATGTCCGAGCCACGCTGA
PROTEIN sequence
Length: 547
MAESGDTQGIPAPEGATQIIDTEYEIGQHNIEGNLGPLGFDIHNPVFLVSALSVVAFVFYALALPEQAGAAFGWLRPWLTSTFDWFFMIAANIFVVFCLVLIVSPWGNVRLGGRDATPDYSYTGWFAMLFAAGMGIGLMFFGVLEPVYHMAISAPLGTPSPFDEAGNLIPENVDRAKAMGLAATIYHWGLHPWAIYAVVALALALFSFNKGLPLTIRSAFYPIFGERIWGWTGHIIDILAVFATLFGLATSLGFGAQQANAGLNHVFGIPVDTTVQVILITLITGVALFSVLRGLDGGVKLLSEINMGIAALLLLFVLLAGPTLAILGDFGQGLLAYAQDLVPLSNPFGRSDDDYREGWTAFYWAWWISWSPFVGMFIARVSRGRTVREFITCVLIIPSLVCVLWMAVFGGVAIDQVLTDPATSAVKAQVIDNYDPPLSLFAMLEGLPLSSITSVIAIVLVIVFFVTSSDSGSLVIDTITAGGKVDAPMPQRVFWATFEGAVAIVLLVGGGLGALQAMVISTGLPFALVLLLMCWAVLKGLMSEPR*