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scnpilot_p_inoc_scaffold_125_13

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(14737..16062)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Rhodobacter sp. SW2 RepID=C8RW60_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 441.0
  • Bit_score: 686
  • Evalue 2.20e-194
  • rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EEW26803.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter. similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 441.0
  • Bit_score: 686
  • Evalue 3.10e-194
mechanosensitive ion channel family protein similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 421.0
  • Bit_score: 558
  • Evalue 2.00e-156

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Taxonomy

Rhodobacter sp. SW2 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGGACAAGCAATCCGAATTCTTCCTCGTGCTGCATGAATGGCTGGACCCGGCGGTCGAGACGGCAAAGCTCTGGCTGCTGTCGCCCGCCGCCTGGTCGCAATTCGCCCTGCTGATCGTGGCCTTCATGGCCGCGCGGCTGCTGACGCTGCGGACCCAGCCGCTGTTCATGCGGCTGATCACCCCGCCGGAGGGCAAGACCGGCTATATGGTCACGGCGCGCCTGTTCGCCAGCCGCTTCCTGCCGCTTCTGCTGCCGCTATTCGCCTGGGCTTTCACCGCTCTGGGAGAAGAGATCACCCGCTCGCTGTTCGGCTCGGGTGCCGTTATCGCCTTTGGCAAGCGCATCTTCTTGTTCCTCGCCGCCCGGATCTTCGTGCGCGAGGTGCTGCGTGACAGCTTCCTGCGGCTGTTGGGTCGCTATGTCCTGATTCCGGTCGCCGCGCTTTATGCGCTTGGCATCCTGGACGAGATTTCGCTGCGGCTGGAAGAAACCATCATCGCTTTCGGCAACATCCGCTTCTCGGTCATGGCACTGATCCGGGGGCTGATTGCGGGATCGCTGCTGTTCTGGCTGGGCGCCTGGTCGAACCGGCAGAGCGCCGATTACATCAAGAAACAGGAAGAGCTGCGCCCGGCCACCCGCGAACTGGCGGTGAAGGCAACCGAGGTTATGATCTTCGGCGCCTCGTTCCTGCTGCTGATGTCGATCATGGGCATCGACCTGACCGCCGTCGCGGTTCTGGGCGGTGCGCTGGGTGTCGGGATCGGCCTTGGCCTGCAGCAGATCGCTGCGAACTTCGTGTCCGGCATCATCCTGCTGCTGGAAGGCCAGACCACCGTCGGCGATTACGTCGAACTGGACGGCGGCGAAAAGGGCACCATCGTCCGGATGACTGCCCGCGCCTGCATTCTGGAAACCTTCGATGGCAAATGGATCGTGGTGCCGAATGACCATTTCATCACCTCGCGCGTGGTCAACTATTCCGATCAGGGGTCAGCCAACCGTTACGAGGCAGAGTTCTCGGTCAGCTATGACACCGATATCAACAAGGTGCCGGAGATCATCGAGGCGGCAGTCGCCGCGCTGCCCTTCGTGCTGACCGAACCCGACGGGCCCGACTGCGAGTTGCGTGGCTTTGGCGAAAGTTCTGTCGATTTCGCGGTGGAATACTGGGTCAACGGCATTGACGATGGCAAGAACCGCTTCGGATCACCCGTGCTGTTCGCCATCTGGAACGCGCTGAAGGACAACGGGATCGAGATGCCCTTCCCGCAGCGCGTGGTCCATCTCCGCAACGCGGGCGCCGAGGCCGCGGGGGCATGA
PROTEIN sequence
Length: 442
MDKQSEFFLVLHEWLDPAVETAKLWLLSPAAWSQFALLIVAFMAARLLTLRTQPLFMRLITPPEGKTGYMVTARLFASRFLPLLLPLFAWAFTALGEEITRSLFGSGAVIAFGKRIFLFLAARIFVREVLRDSFLRLLGRYVLIPVAALYALGILDEISLRLEETIIAFGNIRFSVMALIRGLIAGSLLFWLGAWSNRQSADYIKKQEELRPATRELAVKATEVMIFGASFLLLMSIMGIDLTAVAVLGGALGVGIGLGLQQIAANFVSGIILLLEGQTTVGDYVELDGGEKGTIVRMTARACILETFDGKWIVVPNDHFITSRVVNYSDQGSANRYEAEFSVSYDTDINKVPEIIEAAVAALPFVLTEPDGPDCELRGFGESSVDFAVEYWVNGIDDGKNRFGSPVLFAIWNALKDNGIEMPFPQRVVHLRNAGAEAAGA*