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scnpilot_p_inoc_scaffold_125

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Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_125_1
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

703..1737
DNA (1035bp) protein (345aa)
alanine racemase (EC:5.1.1.1); K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor Tax=GWF1_Rhodobacteraceae_65_7_curated
alanine racemase (EC:5.1.1.1)
Transcriptional regulator, LacI family id=2984508 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
scnpilot_p_inoc_scaffold_125_2
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1757..2299)
DNA (543bp) protein (181aa)
Peptidoglycan-binding domain 1 protein id=2984500 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
antifreeze protein, type I Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_125_3
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2947..5430
DNA (2484bp) protein (828aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXA8_9RHOB rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:EEW26633.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhod
DNA/RNA helicase, superfamily II
scnpilot_p_inoc_scaffold_125_4
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5449..6072)
DNA (624bp) protein (208aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXA7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO54315.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
enoyl-CoA hydratase/isomerase
scnpilot_p_inoc_scaffold_125_5
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6069..6821)
DNA (753bp) protein (251aa)
ucpA; oxidoreductase UcpA (EC:1.-.-.-)
20-beta-hydroxysteroid dehydrogenase, putative n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQH6_9RHOB rbh
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_p_inoc_scaffold_125_6
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6939..8450
DNA (1512bp) protein (504aa)
Putative uncharacterized protein id=2984423 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_125_7
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8517..10049
DNA (1533bp) protein (511aa)
pepQ1; dipeptidase PepE (EC:3.4.13.9) Tax=GWF1_Rhodobacteraceae_65_7_curated
Peptidase M24 id=2634419 bin=GWF1_Rhodobacteraceae_65_7 species=Hoeflea phototrophica genus=Hoeflea taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
conserved putative hydrolase/peptidase of the M24 family
scnpilot_p_inoc_scaffold_125_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10106..11446
DNA (1341bp) protein (447aa)
C69 family peptidase; K03592 PmbA protein Tax=GWF1_Rhodobacteraceae_65_7_curated
Peptidase U62 modulator of DNA gyrase id=2634422 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
C69 family peptidase
scnpilot_p_inoc_scaffold_125_9
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11433..12215
DNA (783bp) protein (261aa)
Inositol-phosphate phosphatase {ECO:0000313|EMBL:EEW26627.1}; EC=3.1.3.25 {ECO:0000313|EMBL:EEW26627.1};; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-phosphate phosphatase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RXA2_9RHOB rbh
scnpilot_p_inoc_scaffold_125_10
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12208..13095
DNA (888bp) protein (296aa)
Putative uncharacterized protein id=2634428 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_125_11
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13156..13482)
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKC4_9RHOB
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;
thioredoxin
scnpilot_p_inoc_scaffold_125_12
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13571..14740)
DNA (1170bp) protein (390aa)
HI0933 family protein id=2634438 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
hypothetical protein; K07007 Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_125_13
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14737..16062)
DNA (1326bp) protein (442aa)
MscS Mechanosensitive ion channel n=1 Tax=Rhodobacter sp. SW2 RepID=C8RW60_9RHOB rbh
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EEW26803.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.
mechanosensitive ion channel family protein
scnpilot_p_inoc_scaffold_125_14
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16170..16889)
DNA (720bp) protein (240aa)
response regulator receiver protein Tax=GWF1_Rhodobacteraceae_65_7_curated
Response regulator receiver protein id=2634442 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
response regulator receiver protein
scnpilot_p_inoc_scaffold_125_15
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16846..17124)
DNA (279bp) protein (93aa)
Putative uncharacterized protein id=2634447 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_125_16
unknown

Not on your lists

17326..17505
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_125_17
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17509..18147
DNA (639bp) protein (213aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWF1_Rhodobacteraceae_65_7_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII id=2634451 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
scnpilot_p_inoc_scaffold_125_18
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18235..19359
DNA (1125bp) protein (375aa)
DNA methylase N-4/N-6 domain-containing protein; K13581 modification methylase [EC:2.1.1.72] Tax=GWF1_Rhodobacteraceae_65_7_curated
DNA methylase N-4/N-6 domain protein id=2634453 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
DNA methylase N-4/N-6 domain-containing protein
scnpilot_p_inoc_scaffold_125_19
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19890..20840)
DNA (951bp) protein (317aa)
Dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJJ0_ACTMD
dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein; K06889 Tax=GWF1_Rhodobacteraceae_65_7_curated
dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein
scnpilot_p_inoc_scaffold_125_20
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20842..21468)
DNA (627bp) protein (209aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWP3_9RHOB
HAD-superfamily hydrolase Tax=GWF1_Rhodobacteraceae_65_7_curated
HAD-superfamily hydrolase
scnpilot_p_inoc_scaffold_125_21
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21514..23403)
DNA (1890bp) protein (630aa)
cpdB; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein; K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] Tax=GWF1_Rhodobacteraceae_65_7_cu
5'-Nucleotidase domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWP2_9RHOB rbh
5'-nucleotidase domain-containing protein
scnpilot_p_inoc_scaffold_125_22
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23618..24568
DNA (951bp) protein (317aa)
NUDIX hydrolase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWP1_9RHOB rbh
NUDIX hydrolase {ECO:0000313|EMBL:EEW26984.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
NUDIX hydrolase
scnpilot_p_inoc_scaffold_125_23
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24632..25099
DNA (468bp) protein (156aa)
Putative uncharacterized protein id=2604543 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWF1_Rhodobacteraceae_65_7_curated
hypothetical protein
scnpilot_p_inoc_scaffold_125_24
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25136..25966)
DNA (831bp) protein (277aa)
Prephenate dehydratase {ECO:0000313|EMBL:ESW59277.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ESW59277.1};; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EGK2_9RHOB rbh
scnpilot_p_inoc_scaffold_125_25
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26100..26627
DNA (528bp) protein (176aa)
Cytochrome c, class I id=2604532 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
cytochrome cy; K08738 cytochrome c Tax=GWF1_Rhodobacteraceae_65_7_curated
cytochrome c, class I
scnpilot_p_inoc_scaffold_125_26
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26802..28709
DNA (1908bp) protein (636aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NLY5_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFI30548.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter ma
extracellular solute-binding protein
scnpilot_p_inoc_scaffold_125_27
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28711..29877
DNA (1167bp) protein (389aa)
Binding-protein-dependent transport systems inner membrane component id=2604528 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEW26979.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
binding-protein-dependent transport system inner membrane protein
scnpilot_p_inoc_scaffold_125_28
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29880..30986
DNA (1107bp) protein (369aa)
Binding-protein-dependent transport systems inner membrane component id=2604525 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
binding-protein-dependent transport systems inner membrane component; K13895 microcin C transport system permease protein Tax=GWF1_Rhodobacteraceae_65_7_curated
binding-protein-dependent transport systems inner membrane component
scnpilot_p_inoc_scaffold_125_29
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30983..32566
DNA (1584bp) protein (528aa)
ABC transporter related protein id=2604523 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
ABC transporter-like protein; K13896 microcin C transport system ATP-binding protein Tax=GWF1_Rhodobacteraceae_65_7_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_125_30
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32578..33804
DNA (1227bp) protein (409aa)
Glycosyl transferase group 1 id=2604519 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
group 1 glycosyl transferase Tax=GWF1_Rhodobacteraceae_65_7_curated
group 1 glycosyl transferase
Displaying items 1-30 of 253 in total

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