ggKbase home page

scnpilot_p_inoc_scaffold_241_123

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 130626..131300

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase, catalytic id=2459028 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 232.0
  • Bit_score: 247
  • Evalue 1.30e-62
invasion protein Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 231.0
  • Bit_score: 247
  • Evalue 1.90e-62
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 208.0
  • Bit_score: 204
  • Evalue 3.70e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCCCTACGCGCTTGCGCTGCTCTGCCTCTGTTTTCTTGCCATGCCTGTGCTGGCGCTGGCGCGGGCCGCTGATTTGTGTGACCGCGCGGCGGAAAGTGCGGCGCGTGAAACGGGCGTTCCGCTGGACGTGTTGCTGGCCCTGACGCGGGCCGAAACGGGCAGGGCCAGCGGCGGCAGGCTCGACCCTTGGCCTTGGGCTGTCAATCAGGGCGGGCAGGGACACTGGTTTGACAGTGCCGCAGCGGCTCGCGACTGGGTGGAAAGCCAGTTTCAGGCGGGGGTCAGCAATATCGACATCGGGTGTTTCCAGCTCAATTACCGCTGGCATTCCAGTGCATTTCCATCGCTTGATGCCATGTTCGACCCGGAGGAGAACGCGCTGTATGCGGCGCATTATCTGGCGGCAAAGTACGACGAAACCGGCGATTGGGAGACGGCGGCAGGCGCTTATCACTCCGCAACGGAGGTTTATGCCCGTCGCTACACCGAGCGGTTTCGCGAAATCCGCGCCGGATTGGCCGCTGCACCGCGACCCGAACTGAGGCTTGCCTCTGCCGACGCTGGGCCGCGTGTGAACCGATACCCGCTATTGCAGGCAGGCGGAGGCGGCGGGCATGGCTCGCTGGTGCCGCGCAGCGCGGGCGGCATCTCGCTCTTTGCGCGCCTGCCCTGA
PROTEIN sequence
Length: 225
MPYALALLCLCFLAMPVLALARAADLCDRAAESAARETGVPLDVLLALTRAETGRASGGRLDPWPWAVNQGGQGHWFDSAAAARDWVESQFQAGVSNIDIGCFQLNYRWHSSAFPSLDAMFDPEENALYAAHYLAAKYDETGDWETAAGAYHSATEVYARRYTERFREIRAGLAAAPRPELRLASADAGPRVNRYPLLQAGGGGGHGSLVPRSAGGISLFARLP*