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scnpilot_p_inoc_scaffold_241_125

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 133368..134141

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion system inner membrane R protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RX58_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 259.0
  • Bit_score: 262
  • Evalue 4.60e-67
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:EEW26583.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 259.0
  • Bit_score: 262
  • Evalue 6.50e-67
flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 255.0
  • Bit_score: 232
  • Evalue 1.10e-58

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Taxonomy

Rhodobacter sp. SW2 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGACGGATTTGTTCGCCCTCCTGTCACAACTGGGTGCTTTTACCGCACCGCTGTTCGCGGCGGCCTTCGTGGTGCTGCTGCGCGTCAGCGGCACGGTCGCACTGATGCCGGGTTTCGGGGAAACCCTGCTGCCAGTTCGTATCAAACTTGTGGCGGCACTGGCTTTCACGCTGGTCGTCGCGCCGGTCGTGATGCCGCAGGGTATGCCGCCCGACACAATCGGCTTCTCCCTGTTCCTGTCGGAACCGGCCATTGGCCTGATGTTCGGGATCGGCCTGCGTCTCTTCATCTTCGCCTTGCAAACCGCAGGAGCGATTATCGCGCAGGCGACATCCTTGTCGCAATTCTTTGGCGGGATGGGGGAATCGCAACCTGCAATGGGCCATGCGCTAAGCCTCGCTGGGATCACGCTTTTCATGGTGATGGATTTGCATGTGCGCGCAGCACAATATCTTGTTGAAAGTTACGCTACTTTCCCGTTGGGGACGATCCTCCCGTCGGGCGATCTGCTGGAATGGGGGCTATGGCAGGTTGGCCGATCATTCCGCCTCGGCCTTGGTTTTGCGACGCCCTTCGTCATCGGATCGCTGATCTACAACATCGCCATAGGGGTGGTGAACAAGGCGATGCCGCAATTGATGGTGGCTTTCATCGGCGCACCGGCCCTGACCCTGGGGGGGCTGGCGCTGTTCGCGCTGACTGCGCCTCTTTTCCTGCCCGTCTGGGGCGCGGCCATAGAGGCCTATTTTCTTGATCCTCTGGCCGCGCCATGA
PROTEIN sequence
Length: 258
MTDLFALLSQLGAFTAPLFAAAFVVLLRVSGTVALMPGFGETLLPVRIKLVAALAFTLVVAPVVMPQGMPPDTIGFSLFLSEPAIGLMFGIGLRLFIFALQTAGAIIAQATSLSQFFGGMGESQPAMGHALSLAGITLFMVMDLHVRAAQYLVESYATFPLGTILPSGDLLEWGLWQVGRSFRLGLGFATPFVIGSLIYNIAIGVVNKAMPQLMVAFIGAPALTLGGLALFALTAPLFLPVWGAAIEAYFLDPLAAP*