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scnpilot_p_inoc_scaffold_241_136

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(144736..145587)

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 283.0
  • Bit_score: 500
  • Evalue 1.60e-138
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 283.0
  • Bit_score: 448
  • Evalue 1.10e-123
Formamidopyrimidine-DNA glycosylase id=2576223 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 284.0
  • Bit_score: 500
  • Evalue 1.10e-138
  • rbh

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGCCCGAACTGCCCGAGGTTGAAACCGTCCGCCGTGGCCTTTTGCCGGTGATGGAGGGGCAGGTGATCGCCCGCGCGCAGGTGAACCGCCCCGACCTGCGCTGGCCCTTCCCGCCCGGCATGGCCGACCGGCTGACCGGGGCCAGGGTGAACACCCTGCGGCGTCGGTCAAAATACATCCTGGCCGATCTTTCGACGGGCGAGACGCTGCTGATCCATCTGGGCATGTCGGGGCGCATGTTGATTTCCGGGACGCAGGTGGGCGGTTTTCACCATGACCACCCCGCGCCTGCCAAGCATGATCATGTCGTGCTGGATATGGATGGGGGCGCCCGCGTCACCTTTAACGATGCCCGCCGCTTTGGCGCGATGGATCTGCTGCCGACGGCGGGGGCCGAGGCGCATCCGCTGTTGTCCGTGCTGGGGCCGGAGCCTCTGGGCAACGATTTCCACGAGCATTATCTGGCCTCCCGCCTGAAAGGCCGTGCCACGCCAGTCAAATCGGCACTGCTGGATCAACACCTGGTGGCGGGGCTGGGGAACATCTACGTCTGCGAGGTGCTGTTCCGCGCCGGTATCCACCCTGCCCGCCTTGCGCGCGACATTTCGCCCGCAGAGGCCGCGCGCCTCGTGCCGCTGATCCGCGAGGTTCTGGCCGAAGCGATCGAGGCGGGCGGCTCGTCGCTGAAGGATTACCGGCAAGCCGATGGCGAACTGGGCTATTTCCAGCACAGTTTCCGGGTCTATGACCGCGAGGGTCAGCCCTGCACGACGCCCGGTTGCACGGCACATCTGCACCGGATCGTGCAATCGGGGCGGTCAAGCTTCTTCTGCCCCATCTGCCAGAGGTAA
PROTEIN sequence
Length: 284
MPELPEVETVRRGLLPVMEGQVIARAQVNRPDLRWPFPPGMADRLTGARVNTLRRRSKYILADLSTGETLLIHLGMSGRMLISGTQVGGFHHDHPAPAKHDHVVLDMDGGARVTFNDARRFGAMDLLPTAGAEAHPLLSVLGPEPLGNDFHEHYLASRLKGRATPVKSALLDQHLVAGLGNIYVCEVLFRAGIHPARLARDISPAEAARLVPLIREVLAEAIEAGGSSLKDYRQADGELGYFQHSFRVYDREGQPCTTPGCTAHLHRIVQSGRSSFFCPICQR*